PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6ly5G_

Fold library id	PDB Header	Molecule	Title
c6ly5G_	2.38	PDB header: photosynthesis	Chain: G: PDB Molecule: fcpi-4;

Links to external resources
Added to library: Sat Oct 24 08:35:53 2020

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A M P E R L W D S M V D K T Q R S K A V P F L P R A V N L D G S L P G D V G F D P F Y L S S I P K D F S G F I Q P P Q W E E K G I P T L Y W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T S T T T
T T S B
S S S T T S B
S S
S
S T T
S
T T
T T
S
G G G T T S
G G G S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence M R E A E L K H S R V A M L A W F G W L A T D G A F G V T L R F P G E I Y S V E N I P T A Y E A H N A L V S Q G S M G F L L L A V G F I E F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T S S
S S G G G S T T T
S S G G G S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence C T G A V L V E V A K G D S D R E A G D F K L D P L S F L K G K S E E E I K R M K T R E I A N G R L A M L A F G G V A T Q T A L E G G N H A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T T
T T
S
T T
S S T T
T T S S S
S

. . . .

Sequence F P Y F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	M	P	E	R	L	W	D	S	M	V	D	K	T	Q	R	S	K	A	V	P	F	L	P	R	A	V	N	L	D	G	S	L	P	G	D	V	G	F	D	P	F	Y	L	S	S	I	P	K	D	F	S	G	F	I	Q	P	P	Q	W	E	E	K	G	I	P	T	L	Y	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S			T	T	S	T	T	T		T	T	S	B		S	S	S	T	T	S	B			S	S			S		S	T	T		S				T	T			T	T			S		G	G	G	T	T	S		G	G	G	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	M	R	E	A	E	L	K	H	S	R	V	A	M	L	A	W	F	G	W	L	A	T	D	G	A	F	G	V	T	L	R	F	P	G	E	I	Y	S	V	E	N	I	P	T	A	Y	E	A	H	N	A	L	V	S	Q	G	S	M	G	F	L	L	L	A	V	G	F	I	E	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T	T	T	T	T	S	S					S	S	G	G	G	S	T	T	T		S	S	G	G	G									S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	C	T	G	A	V	L	V	E	V	A	K	G	D	S	D	R	E	A	G	D	F	K	L	D	P	L	S	F	L	K	G	K	S	E	E	E	I	K	R	M	K	T	R	E	I	A	N	G	R	L	A	M	L	A	F	G	G	V	A	T	Q	T	A	L	E	G	G	N	H	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S							T	T						T	T			S			T	T		S	S	T	T																															T	T	S	S	S				S
	.	.	.	.
Sequence	F	P	Y	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S