PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6loiF_

Fold library id	PDB Header	Molecule	Title
c6loiF_	2.50	PDB header: transferase	Chain: F: PDB Molecule: isoprenyl transferase;

Links to external resources
Added to library: Sat Jun 20 08:23:15 2020

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Y A F D K E G Q I P Q H I A I I M D G N G R W A Q N R R L P R I A G H K E G M D T V K K I T K H A S H L G V K V L T L Y A F N F L M Q L P V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S
T T
T T T
S
G G G S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D F F D T F P E L I K E N V K V N V M G Y Q E F L P S H T Q D A V K R A I E Q T K D N T G M V L N F A L N Y G A R A E L L T A M K Q I A A E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
G G G S
T T T T
S
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V S E K A Y T A D E I T E E T I A D H L M T G F L P T E L R D P E L L I R T S G E E R I S N F L L W Q I A Y S E L F F T K A L W P D F S G D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S
G G G
T S T T T T S
S T T S S
S
T T
S S S T T G G G G
S S
G G G

. . . . . . . . . 220 . .

Sequence T L E T A I A S F Q N R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Y	A	F	D	K	E	G	Q	I	P	Q	H	I	A	I	I	M	D	G	N	G	R	W	A	Q	N	R	R	L	P	R	I	A	G	H	K	E	G	M	D	T	V	K	K	I	T	K	H	A	S	H	L	G	V	K	V	L	T	L	Y	A	F	N	F	L	M	Q	L	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S				S																T	T			T	T																					T		S									G	G	G	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	F	F	D	T	F	P	E	L	I	K	E	N	V	K	V	N	V	M	G	Y	Q	E	F	L	P	S	H	T	Q	D	A	V	K	R	A	I	E	Q	T	K	D	N	T	G	M	V	L	N	F	A	L	N	Y	G	A	R	A	E	L	L	T	A	M	K	Q	I	A	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T							S		G	G	G	S														T	T	T	T			S							S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	S	E	K	A	Y	T	A	D	E	I	T	E	E	T	I	A	D	H	L	M	T	G	F	L	P	T	E	L	R	D	P	E	L	L	I	R	T	S	G	E	E	R	I	S	N	F	L	L	W	Q	I	A	Y	S	E	L	F	F	T	K	A	L	W	P	D	F	S	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S	S		G	G	G									T	S	T	T	T	T	S		S	T	T	S	S		S						T	T						S	S	S	T	T	G	G	G	G							S	S		G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.
Sequence	T	L	E	T	A	I	A	S	F	Q	N	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T