PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6lleA_

Fold library id	PDB Header	Molecule	Title
c6lleA_	2.90	PDB header: metal transport	Chain: A: PDB Molecule: sarcoplasmic/endoplasmic reticulum calcium atpase 2;

Links to external resources
Added to library: Sat Aug 29 09:46:13 2020

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M E N A H T K T V E E V L G H F G V N E S T G L S L E Q V K K L K E R W G S N E L P A E E G K T L L E L V I E Q F E D L L V R I L L L A A C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T S
T
B T T T B B
S
S S
G G G G S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I S F V L A W F E E G E E T I T A F V E P F V I L L I L V A N A I V G V W Q E R N A E N A I E A L K E Y E P E M G K V Y R Q D R K S V Q R I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S S S
S S S S T T T S S
B T T S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K A K D I V P G D I V E I A V G D K V P A D I R L T S I K S T T L R V D Q S I L T G E S V S V I K H T D P V P D P R A V N Q D K K N M L F S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T
T T T S B
S S S S
S
S S
S
T T
T T T
T T
T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence G T N I A A G K A M G V V V A T G V N T E I G K I R D E M V A T E Q E R T P L Q Q K L D E F G E Q L S K V I S L I C I A V W I I N I G H F N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
G G G S T T T T T S S
T T S G G G S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence D P V H G G S W I R G A I Y Y F K I A V A L A V A A I P E G L P A V I T T C L A L G T R R M A K K N A I V R S L P S V E T L G C T S V I C S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T S S S
T T T T T S S G G G G S G G G S

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence D K T G T L T T N Q M S V C R M F I L D R V E G D T C S L N E F T I T G S T Y A P I G E V H K D D K P V N C H Q Y D G L V E L A T I C A L C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
T T
S S S
S
S S S S B
S S S
S T

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence N D S A L D Y N E A K G V Y E K V G E A T E T A L T C L V E K M N V F D T E L K G L S K I E R A N A C N S V I K Q L M K K E F T L E F S R D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T S
T T
S S
T T T T S S T T T T

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence R K S M S V Y C T P N K P S S M S K M F V K G A P E G V I D R C T H I R V G S T K V P M T S G V K Q K I M S V I R E W G S G S D T L R C L A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S
T T
S S S

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence L A T H D N P L R R E E M H L E D S A N F I K Y E T N L T F V G C V G M L D P P R I E V A S S V K L C R Q A G I R V I M I T G D N K G T A V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
G G G
S S G G G G G G T S
S
B
T T T T
S S

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence A I C R R I G I F G Q D E D V T S K A F T G R E F D E L N P S A Q R D A C L N A R C F A R V E P S H K S K I V E F L Q S F D E I T A M T G D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S
T T
T T T S S
S
T S

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence G V N D A P A L K K A E I G I A M G S G T A V A K T A S E M V L A D D N F S T I V A A V E E G R A I Y N N M K Q F I R Y L I S S N V G E V V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T T S S T T S
S
S T T
T T

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence C I F L T A A L G F P E A L I P V Q L L W V N L V T D G L P A T A L G F N P P D L D I M N K P P R N P K E P L I S G W L F F R Y L A I G C Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
S S G G G G
T T T T S S
T T S
S S

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence V G A A T V G A A A W W F I A A D G G P R V S F Y Q L S H F L Q C K E D N P D F E G V D C A I F E S P Y P M T M A L S V L V T I E M C N A L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S S
T G G G
T T S T T
S
G G G T T

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence N S L S E N Q S L L R M P P W E N I W L V G S I C L S M S L H F L I L Y V E P L P L I F Q I T P L N V T Q W L M V L K I S L P V I L M D E T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S S
T T T S
G G G S S T T S T
T

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020

Sequence L K F V A R N Y L E G I S W P F V L L I M P L V I W V Y S T D T N F S D M F W S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S
S
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	E	N	A	H	T	K	T	V	E	E	V	L	G	H	F	G	V	N	E	S	T	G	L	S	L	E	Q	V	K	K	L	K	E	R	W	G	S	N	E	L	P	A	E	E	G	K	T	L	L	E	L	V	I	E	Q	F	E	D	L	L	V	R	I	L	L	L	A	A	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	T	T	S										T		B	T	T	T	B	B															S							S	S								G	G	G	G	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	S	F	V	L	A	W	F	E	E	G	E	E	T	I	T	A	F	V	E	P	F	V	I	L	L	I	L	V	A	N	A	I	V	G	V	W	Q	E	R	N	A	E	N	A	I	E	A	L	K	E	Y	E	P	E	M	G	K	V	Y	R	Q	D	R	K	S	V	Q	R	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T		S	S	S	S			S	S	S	S	T																																T	T	S	S								B	T	T	S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	A	K	D	I	V	P	G	D	I	V	E	I	A	V	G	D	K	V	P	A	D	I	R	L	T	S	I	K	S	T	T	L	R	V	D	Q	S	I	L	T	G	E	S	V	S	V	I	K	H	T	D	P	V	P	D	P	R	A	V	N	Q	D	K	K	N	M	L	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S			T	T						T	T	T	S	B			S								S	S	S														S						S	S			S		T	T			T	T	T		T	T				T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	G	T	N	I	A	A	G	K	A	M	G	V	V	V	A	T	G	V	N	T	E	I	G	K	I	R	D	E	M	V	A	T	E	Q	E	R	T	P	L	Q	Q	K	L	D	E	F	G	E	Q	L	S	K	V	I	S	L	I	C	I	A	V	W	I	I	N	I	G	H	F	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																G	G	G	S	T	T	T	T	T	S	S																																					T	T	S	G	G	G	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	D	P	V	H	G	G	S	W	I	R	G	A	I	Y	Y	F	K	I	A	V	A	L	A	V	A	A	I	P	E	G	L	P	A	V	I	T	T	C	L	A	L	G	T	R	R	M	A	K	K	N	A	I	V	R	S	L	P	S	V	E	T	L	G	C	T	S	V	I	C	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T	T	S	S																				S		T	T																		T	T	T				S	S	G	G	G	G	S	G	G	G	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	D	K	T	G	T	L	T	T	N	Q	M	S	V	C	R	M	F	I	L	D	R	V	E	G	D	T	C	S	L	N	E	F	T	I	T	G	S	T	Y	A	P	I	G	E	V	H	K	D	D	K	P	V	N	C	H	Q	Y	D	G	L	V	E	L	A	T	I	C	A	L	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							B																	T	T												S	S	S		S						S	S	S	S	B			S	S	S		S												T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	N	D	S	A	L	D	Y	N	E	A	K	G	V	Y	E	K	V	G	E	A	T	E	T	A	L	T	C	L	V	E	K	M	N	V	F	D	T	E	L	K	G	L	S	K	I	E	R	A	N	A	C	N	S	V	I	K	Q	L	M	K	K	E	F	T	L	E	F	S	R	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T	T						S																T	T					S	S			T	T	T	T	S	S								T	T											T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	R	K	S	M	S	V	Y	C	T	P	N	K	P	S	S	M	S	K	M	F	V	K	G	A	P	E	G	V	I	D	R	C	T	H	I	R	V	G	S	T	K	V	P	M	T	S	G	V	K	Q	K	I	M	S	V	I	R	E	W	G	S	G	S	D	T	L	R	C	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T									S	S																										T	T																							S	S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	A	T	H	D	N	P	L	R	R	E	E	M	H	L	E	D	S	A	N	F	I	K	Y	E	T	N	L	T	F	V	G	C	V	G	M	L	D	P	P	R	I	E	V	A	S	S	V	K	L	C	R	Q	A	G	I	R	V	I	M	I	T	G	D	N	K	G	T	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S				G	G	G				S	S	G	G	G	G	G	G	T	S		S													B		T	T											T	T								S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	A	I	C	R	R	I	G	I	F	G	Q	D	E	D	V	T	S	K	A	F	T	G	R	E	F	D	E	L	N	P	S	A	Q	R	D	A	C	L	N	A	R	C	F	A	R	V	E	P	S	H	K	S	K	I	V	E	F	L	Q	S	F	D	E	I	T	A	M	T	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	S	S		T	T				T	T	T									S	S																	S																T	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	G	V	N	D	A	P	A	L	K	K	A	E	I	G	I	A	M	G	S	G	T	A	V	A	K	T	A	S	E	M	V	L	A	D	D	N	F	S	T	I	V	A	A	V	E	E	G	R	A	I	Y	N	N	M	K	Q	F	I	R	Y	L	I	S	S	N	V	G	E	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	T	T							S	S						T	T	S							S		S				T	T			T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	C	I	F	L	T	A	A	L	G	F	P	E	A	L	I	P	V	Q	L	L	W	V	N	L	V	T	D	G	L	P	A	T	A	L	G	F	N	P	P	D	L	D	I	M	N	K	P	P	R	N	P	K	E	P	L	I	S	G	W	L	F	F	R	Y	L	A	I	G	C	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T				S														S	S					G	G	G	G					T	T	T	T	S	S					T	T	S		S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	V	G	A	A	T	V	G	A	A	A	W	W	F	I	A	A	D	G	G	P	R	V	S	F	Y	Q	L	S	H	F	L	Q	C	K	E	D	N	P	D	F	E	G	V	D	C	A	I	F	E	S	P	Y	P	M	T	M	A	L	S	V	L	V	T	I	E	M	C	N	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S		S	S	S										T	G	G	G			T	T	S	T	T			S			G	G	G	T	T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	N	S	L	S	E	N	Q	S	L	L	R	M	P	P	W	E	N	I	W	L	V	G	S	I	C	L	S	M	S	L	H	F	L	I	L	Y	V	E	P	L	P	L	I	F	Q	I	T	P	L	N	V	T	Q	W	L	M	V	L	K	I	S	L	P	V	I	L	M	D	E	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S		S	S			T	T	T	S		G	G	G	S																				S	T	T	S					T																	T
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020
Sequence	L	K	F	V	A	R	N	Y	L	E	G	I	S	W	P	F	V	L	L	I	M	P	L	V	I	W	V	Y	S	T	D	T	N	F	S	D	M	F	W	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S																					S	S					S			S