PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6lk8a_

Fold library id	PDB Header	Molecule	Title
c6lk8a_	5.50	PDB header: structural protein	Chain: A: PDB Molecule: mgc83295 protein;

Links to external resources
Added to library: Sat Jul 24 08:30:17 2021

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L W G P Y R E I W Q T V L S A L I K R Q P E A V H S L I V L K K Y K P D F I S L F K N P P K S A Q Q H E R V Q K A S T E G I P I K G T Q R T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T S S
T T
S
S
S S S
G G G
T T
B
S S
B
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R I L E E Q L I K E A F I L S D L Y N I G E I A A V E L L L I G E Q Q Q P T F H G L T R G L V A I L L Y W D G K S C M A E S L L H L I Q A R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T
S S
S
S S
G G G T T
S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K G K T F T L D H S P E Q G L T N K I L T L I S Q I D V N N E F D K L K K E R G L G N K K H R K E V S D L I K E C Q Q S L A H S L Y S W S C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
B T T B S T T
S
S T
S T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence Q T P L N R E D T L L L I G Y L E K V T V E G D G S L D K V N L T L L M S L L Y C L D V G F L E Q G T D D R E E L M K Q A S M F M D R Q Y I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T
S T T S
S S S
S S
T T T
S
S S S S S
S

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence A A I H N R L Q N T Q P W K S P G M Q A T V R L A W A L A L R G I S Q F S E V L E F S E A D E P M A E I A I G G N V F L F L T E A V V G S E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G G S
S S S S
T T T T T

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence S F C T D E F F I R R I H K L V T D F P T L M P M K V K Q L R N R A E E D A R L I Q M S M Q M G N E P P A S L R R D L E H L L L L I G E L Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T T T S
S S
S S T T S S G G G

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence R K D P F H L E L A L E Y W C Q R Q V L L S K F V R Q M S D L L P A T L Y L P Y L K M L R G L A S G P Q C A H Y C F S L L K A N G G S S A E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
S G G G G T
T
T T
S S
S T T T

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence N L Q A A G G S P V S W D H F F H S L M L Y H E H L R R D L P N T D N I H Q R H P P L R G I T Q R E L D G L I A C L Q L T C T I I D W S E S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S
S
T T T
S S S S

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence A R L A L C E M P V V V I L G L L Q C S I P P L L K A E L L K T L A A F E P Y L Q F L R D T V F L R Y R T R A Y R R A A E K W E V A E A V L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
T T T T S T T

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence D V F Y K L L K D Y A F K P P G F S L M H H L L N E S P M L E L C L S L M E E G V F P G K K H L E K A V A Y C F M L L N L T L Q K S M I V T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T
T T

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence P L E Q L L Q G I N P R S K K A D N V V N I A R Y L C H G E L A F E S A K I L C S I S Q E K I V G D F T Q D Q N V S Q K L M V G F V Y M T K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T T T S T T

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence I H I L N L L I T S L E M K K P V S T T N L Q D L G C P R T C L H S I L D I L D T P H L A E L C Y Q V I Y Q L C A P T M R Y L R T S Q D F E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence S E I S A M N Q M S W L M K T A T I E L R I T S L N R Q R S H T Q R L L H L L L D F D T T S K V R R K I L R I L D I P E P L Q L D F F Q I E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence Q V I A N C E H K N R V K L L H R V L V A E V N A L Q G M A A I G Q R P L L M E E I N T I L Q Y V V E R N K L L Q C L H A K R H A L E S W R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T T

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence Q L V E I I L T A C P Q D L I P T E H R Q L I I R D L L Q D L H V K I L D Q E L M P I V A G A V F T L T A H L S Q S V R T E L K T E N I S A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T T T S S
S T T
T

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence G F A S I G D S S L H M I L R N L L E F I L K T F Q R V R A H L Y G S L L Y Y L Q I A Q R P D E S K L Q R D N L S I F E S Y G H D I G R M L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence A L A L L D R I V S V Q Q W L L Y L S Y L K V L V D S L A E D D V T P Q P P L L K A L Y I Y E S K M A F L T R V A K I E L L R S G V I V R L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence A Q C Q V Y D V F I P A P V E R Y R Q I L L P A L Q I C Q L I L T S S T A Q H L Q A A G Q V L Q F L V A H S D T I Q A I L R S Q E G S L G S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
T T T T T
T T

. . . . . . . . . 1270 . .

Sequence L Q E L A L L T G I I S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G G T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	W	G	P	Y	R	E	I	W	Q	T	V	L	S	A	L	I	K	R	Q	P	E	A	V	H	S	L	I	V	L	K	K	Y	K	P	D	F	I	S	L	F	K	N	P	P	K	S	A	Q	Q	H	E	R	V	Q	K	A	S	T	E	G	I	P	I	K	G	T	Q	R	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S																T	S	S																			T	T				S		S			S	S	S		G	G	G		T	T				B		S	S		B		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	I	L	E	E	Q	L	I	K	E	A	F	I	L	S	D	L	Y	N	I	G	E	I	A	A	V	E	L	L	L	I	G	E	Q	Q	Q	P	T	F	H	G	L	T	R	G	L	V	A	I	L	L	Y	W	D	G	K	S	C	M	A	E	S	L	L	H	L	I	Q	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T																	T												S	S			S		S	S		G	G	G	T	T		S	S																						S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	G	K	T	F	T	L	D	H	S	P	E	Q	G	L	T	N	K	I	L	T	L	I	S	Q	I	D	V	N	N	E	F	D	K	L	K	K	E	R	G	L	G	N	K	K	H	R	K	E	V	S	D	L	I	K	E	C	Q	Q	S	L	A	H	S	L	Y	S	W	S	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S				B	T	T	B	S	T	T																S		S													T		S	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Q	T	P	L	N	R	E	D	T	L	L	L	I	G	Y	L	E	K	V	T	V	E	G	D	G	S	L	D	K	V	N	L	T	L	L	M	S	L	L	Y	C	L	D	V	G	F	L	E	Q	G	T	D	D	R	E	E	L	M	K	Q	A	S	M	F	M	D	R	Q	Y	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	T	T		S	T	T										S			S	S	S		S	S			T	T														T								S				S	S	S	S	S			S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	A	I	H	N	R	L	Q	N	T	Q	P	W	K	S	P	G	M	Q	A	T	V	R	L	A	W	A	L	A	L	R	G	I	S	Q	F	S	E	V	L	E	F	S	E	A	D	E	P	M	A	E	I	A	I	G	G	N	V	F	L	F	L	T	E	A	V	V	G	S	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											G	G	G	G	S																					S	S	S	S							T									T	T	T											T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	S	F	C	T	D	E	F	F	I	R	R	I	H	K	L	V	T	D	F	P	T	L	M	P	M	K	V	K	Q	L	R	N	R	A	E	E	D	A	R	L	I	Q	M	S	M	Q	M	G	N	E	P	P	A	S	L	R	R	D	L	E	H	L	L	L	L	I	G	E	L	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T																												T	T						T	T	S			S	S				S	S	T	T	S	S	G	G	G
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	R	K	D	P	F	H	L	E	L	A	L	E	Y	W	C	Q	R	Q	V	L	L	S	K	F	V	R	Q	M	S	D	L	L	P	A	T	L	Y	L	P	Y	L	K	M	L	R	G	L	A	S	G	P	Q	C	A	H	Y	C	F	S	L	L	K	A	N	G	G	S	S	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	T			S	G	G	G	G	T																T																T	T			S													S		S	T	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	N	L	Q	A	A	G	G	S	P	V	S	W	D	H	F	F	H	S	L	M	L	Y	H	E	H	L	R	R	D	L	P	N	T	D	N	I	H	Q	R	H	P	P	L	R	G	I	T	Q	R	E	L	D	G	L	I	A	C	L	Q	L	T	C	T	I	I	D	W	S	E	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S						S																					S			T	T					T				S	S	S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	R	L	A	L	C	E	M	P	V	V	V	I	L	G	L	L	Q	C	S	I	P	P	L	L	K	A	E	L	L	K	T	L	A	A	F	E	P	Y	L	Q	F	L	R	D	T	V	F	L	R	Y	R	T	R	A	Y	R	R	A	A	E	K	W	E	V	A	E	A	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			S			S	S																						T					T	T						T	S	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	D	V	F	Y	K	L	L	K	D	Y	A	F	K	P	P	G	F	S	L	M	H	H	L	L	N	E	S	P	M	L	E	L	C	L	S	L	M	E	E	G	V	F	P	G	K	K	H	L	E	K	A	V	A	Y	C	F	M	L	L	N	L	T	L	Q	K	S	M	I	V	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S	S													T																																								T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	P	L	E	Q	L	L	Q	G	I	N	P	R	S	K	K	A	D	N	V	V	N	I	A	R	Y	L	C	H	G	E	L	A	F	E	S	A	K	I	L	C	S	I	S	Q	E	K	I	V	G	D	F	T	Q	D	Q	N	V	S	Q	K	L	M	V	G	F	V	Y	M	T	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T																																						T	T	T	T	S	T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	I	H	I	L	N	L	L	I	T	S	L	E	M	K	K	P	V	S	T	T	N	L	Q	D	L	G	C	P	R	T	C	L	H	S	I	L	D	I	L	D	T	P	H	L	A	E	L	C	Y	Q	V	I	Y	Q	L	C	A	P	T	M	R	Y	L	R	T	S	Q	D	F	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	S	E	I	S	A	M	N	Q	M	S	W	L	M	K	T	A	T	I	E	L	R	I	T	S	L	N	R	Q	R	S	H	T	Q	R	L	L	H	L	L	L	D	F	D	T	T	S	K	V	R	R	K	I	L	R	I	L	D	I	P	E	P	L	Q	L	D	F	F	Q	I	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																																								T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	Q	V	I	A	N	C	E	H	K	N	R	V	K	L	L	H	R	V	L	V	A	E	V	N	A	L	Q	G	M	A	A	I	G	Q	R	P	L	L	M	E	E	I	N	T	I	L	Q	Y	V	V	E	R	N	K	L	L	Q	C	L	H	A	K	R	H	A	L	E	S	W	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																													S			T	T	T
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	Q	L	V	E	I	I	L	T	A	C	P	Q	D	L	I	P	T	E	H	R	Q	L	I	I	R	D	L	L	Q	D	L	H	V	K	I	L	D	Q	E	L	M	P	I	V	A	G	A	V	F	T	L	T	A	H	L	S	Q	S	V	R	T	E	L	K	T	E	N	I	S	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	T	T	T	T	S	S		S	T	T																			T
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	G	F	A	S	I	G	D	S	S	L	H	M	I	L	R	N	L	L	E	F	I	L	K	T	F	Q	R	V	R	A	H	L	Y	G	S	L	L	Y	Y	L	Q	I	A	Q	R	P	D	E	S	K	L	Q	R	D	N	L	S	I	F	E	S	Y	G	H	D	I	G	R	M	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																																													T
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	A	L	A	L	L	D	R	I	V	S	V	Q	Q	W	L	L	Y	L	S	Y	L	K	V	L	V	D	S	L	A	E	D	D	V	T	P	Q	P	P	L	L	K	A	L	Y	I	Y	E	S	K	M	A	F	L	T	R	V	A	K	I	E	L	L	R	S	G	V	I	V	R	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																																									T
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	A	Q	C	Q	V	Y	D	V	F	I	P	A	P	V	E	R	Y	R	Q	I	L	L	P	A	L	Q	I	C	Q	L	I	L	T	S	S	T	A	Q	H	L	Q	A	A	G	Q	V	L	Q	F	L	V	A	H	S	D	T	I	Q	A	I	L	R	S	Q	E	G	S	L	G	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T																										T	T	T		T	T												T	T	T										T	T
	.	.	.	.	.	.	.	.	.	1270	.	.
Sequence	L	Q	E	L	A	L	L	T	G	I	I	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							G	G	G	G	T