PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6ljcC_

Fold library id	PDB Header	Molecule	Title
c6ljcC_	1.85	PDB header: cytosolic protein	Chain: C: PDB Molecule: actin-binding protein fragmin p;

Links to external resources
Added to library: Sat Jan 4 08:15:55 2020

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Y R T R L L H L K G K K H I R V H E V P K T Y K S L N S G D V F V L D A G K T V I Q W N G A K A G L L E K V K A A E L L Q A I E G E R E G I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
S S G G G
B T T S
S S
T T
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A S G R V V A E A D N D T E F F T L L G D K G P I A D A A A G G S D L E A D K K D Q P A V L L R L S D A S G K F E F T E V A R G L K V K R N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S G G G
S
B
G G G G
T T S S
G G G
G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . .

Sequence L L D S N D V F V L Y T G A E V F A W V G K H A S V G E K K K A L S F A Q E Y V Q K A G L P I H T P V A R I L E G G E N E V F E D F F D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G
T T S
S S
T T
T T
T T
T T S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg
Disclaimer

Terms and Conditions

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Y	R	T	R	L	L	H	L	K	G	K	K	H	I	R	V	H	E	V	P	K	T	Y	K	S	L	N	S	G	D	V	F	V	L	D	A	G	K	T	V	I	Q	W	N	G	A	K	A	G	L	L	E	K	V	K	A	A	E	L	L	Q	A	I	E	G	E	R	E	G	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S	S								S	S	G	G	G		B	T	T	S							S	S								T	T																					T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	S	G	R	V	V	A	E	A	D	N	D	T	E	F	F	T	L	L	G	D	K	G	P	I	A	D	A	A	A	G	G	S	D	L	E	A	D	K	K	D	Q	P	A	V	L	L	R	L	S	D	A	S	G	K	F	E	F	T	E	V	A	R	G	L	K	V	K	R	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S							G	G	G										S						B		G	G	G	G																					T	T	S	S									G	G	G			G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
Sequence	L	L	D	S	N	D	V	F	V	L	Y	T	G	A	E	V	F	A	W	V	G	K	H	A	S	V	G	E	K	K	K	A	L	S	F	A	Q	E	Y	V	Q	K	A	G	L	P	I	H	T	P	V	A	R	I	L	E	G	G	E	N	E	V	F	E	D	F	F	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G			T	T	S							S	S								T	T																				T	T			T	T								T	T	S								T	T