PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6l77A_

Fold library id	PDB Header	Molecule	Title
c6l77A_	1.90	PDB header: unknown function	Chain: A: PDB Molecule: ms5a;

Links to external resources
Added to library: Sat Jun 6 08:28:27 2020

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D C P L V V K L Y A T V G L H R Y N X L E G T N L Y L H K I E K Y V V V C T L X P V S Y N I T L I A E D P A T S S F V V F E T N V D Q R S L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S S S T T T T
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G Q I D F T C Y I S R P K G P N Q F F D A K D L P D K W P S K E A F A D Q S R F L Y K X Q K S D W E E H D W I R L Y X E I S F F N R D R C L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S
S S
T T S
T
T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence D H N X S D L K I L D V V V E T E E N V P R E T V L K S L R N V L V Y I R Y D Q D L A D G V C K H I A I V R R T V E P T T H C V C L L G E S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G S S
S
T T T

. . . .

Sequence Q L V P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	C	P	L	V	V	K	L	Y	A	T	V	G	L	H	R	Y	N	X	L	E	G	T	N	L	Y	L	H	K	I	E	K	Y	V	V	V	C	T	L	X	P	V	S	Y	N	I	T	L	I	A	E	D	P	A	T	S	S	F	V	V	F	E	T	N	V	D	Q	R	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T																S	S	S													T	T	T	T														S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	Q	I	D	F	T	C	Y	I	S	R	P	K	G	P	N	Q	F	F	D	A	K	D	L	P	D	K	W	P	S	K	E	A	F	A	D	Q	S	R	F	L	Y	K	X	Q	K	S	D	W	E	E	H	D	W	I	R	L	Y	X	E	I	S	F	F	N	R	D	R	C	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S																				S				S	S										T	T	S														T															T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	H	N	X	S	D	L	K	I	L	D	V	V	V	E	T	E	E	N	V	P	R	E	T	V	L	K	S	L	R	N	V	L	V	Y	I	R	Y	D	Q	D	L	A	D	G	V	C	K	H	I	A	I	V	R	R	T	V	E	P	T	T	H	C	V	C	L	L	G	E	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				G	G	G											S	S										S																															T	T	T
	.	.	.	.
Sequence	Q	L	V	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)