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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6l2tB_

Fold library idPDB HeaderMoleculeTitle
c6l2tB_4.10PDB header: viral proteinChain: B: PDB Molecule: b646l,major capsid protein;


Added to library: Sat Mar 7 08:24:35 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence CLIANDGKADKIILAQDLLNSRISNIKNVNKSYGKPDPEPTLSQIEETHLVHFNAHFKPYVPVGFEYNKV
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Known secondary structure (DSSP)






SSS
TT
S

S

SSSGGGS


SS













B
 .........80.........90.........100.........110.........120.........130.........140
Sequence RPHTGTPTLGNKLTFGIPQYGDFFHDMVGHHILGACHSSWQDAPIQGTSQMGAHGQLQTFPRNGYDWDNQ
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Known secondary structure (DSSP)


S

STTS







TT
SS









B



SSS



SSSS




GGGSBSSSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TPLEGAVYTLVDPFGRPIVPGTKNAYRNLVYYCEYPGLRLYENVRFEVNGNSLDEYSSDVTTLVRKFCIP
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Known secondary structure (DSSP) SB
S





SSS




TT


B


SS
TTTTTTTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence GDKMTGYKHLVGQEVSVEGTSGPLLCNIHDLHKPHQSKPILTDENDTQRTCSHTNPKFLSQHFPHFPENI
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Known secondary structure (DSSP) STTTT














SSSS




SS







S
SSSS
TTSS
SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence QTAGKQDITPITDATYLDIRRNVHYSCNGPQTPKYYQPPLALWIKLRFWFNDNVNAIPSVSIPFGERFIT
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Known secondary structure (DSSP)


SS


S
SS
S
S





STTS
BS






B

SSSSS






SSS
SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence IKLASQKDLVNEFPGLFVRQSTVIAGRPSRRNIRFKPWFIPGVINEISLTNNELYINNLFVTPEIHNLYV
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Known secondary structure (DSSP)

STTT

S






SSTT





B















TTTTTTST
 .........430.........440.........450.........460.........470.........480.........490
Sequence KRVRFSLIRVHKTQVTHTNNNHHDEKLMSALKWPIEYMFIGLKPTWNISDQNPHQHRDWHKFGHVVNAIM
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Known secondary structure (DSSP) T



B





B






SSS


B

S

S
B


TTSS
TT
TTTTTS
S
SS

B


B
 .........500.........510.........520.........530.........540.........550.........560
Sequence QPTHHAEISFQDRDTALPDACSSISDISPVTYPITLPIIKNISVTAHGINLIDKFPSQFCSSYIPFHYGG
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Known secondary structure (DSSP)








SS

S
S
S






B


B







TT



TTTTTTTTTT
 .........570.........580.........590.........600.........610.........620........
Sequence NAIKTPDDPGAMMITFALYPREEYQPSGHINVSRAREFYISWDSDYVGSITTADLVVSSSAINFLLLQ
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Known secondary structure (DSSP) TS



SSTT
B



SSSSSSSSS



B
TTTS





SS
SSSS


B


B



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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