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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c6kc0A_

Fold library idPDB HeaderMoleculeTitle
c6kc0A_2.30PDB header: dna binding proteinChain: A: PDB Molecule: crispr system single-strand-specific deoxyribonuclease


Added to library: Sat Jul 4 09:43:56 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MEIDELTALGGLLHDIGKPVQRAGLYSGDHSTQGARFLRDLAENTGRAEYELLSLFSEFHNDELMIRRIK
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Known secondary structure (DSSP)

TTTT
SSS


T



 .........80.........90.........100.........110.........120.........130.........140
Sequence ELSPERFGLTMEDVLNALWIVYEADNLAPQASRPLYSVFNPGKAYPWAELDFEKELPVPGDVFSIRSQDY
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Known secondary structure (DSSP)
GGGGT




TT


TT




SSSS





BS




 .........150.........160.........170.........180.........190.........200.........210
Sequence RELVKRLWEELSKAKLRSDRLLPVLEKYLTFVSSVTSEGNIISLYDHMRMTSAIALAMLRAGCTAEDVRS
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Known secondary structure (DSSP) S
SSTTSBSS
STT


BTT

 .........220.........230.........240.........250.........260.........270.........280
Sequence GRCRKEKRFLLIEGDFSGIQDFIYRVSGKGTLKYLRARSAYLELIGWDVVLEILSRLGLTRANVVFNAGG
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Known secondary structure (DSSP) TS





SS

T

GGG
SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence HFMIIAQNTPDAVKELEEIRAKAVEWLYREFESDLYLAIEWEPVSGREFGREGGKNLFAEARKRLKHKLT
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Known secondary structure (DSSP)

TTSS
GGGGS
TTTT
 .........360.........370.........380.........390.........400.........410.........420
Sequence VRKLKRFCPVCGRCPTCNRLVSLGGNLPKLLGFGRTAKNDAGVLVEGPFSGFVPYLQGGRPVGEQILVKN
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Known secondary structure (DSSP) T


TTT


GGG
TTSTT


SS
SSS


SST
 .........430.........440.........450.........460.........470.........480.........490
Sequence TLNPGEIPESAQFVPYFVADYFKARLGVLRLDVDNLGQAFTHGFGKFNTISRTAAFSRMLSLFFRQHINY
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Known secondary structure (DSSP)
S

TTS
TTS




B


TTS


TT
ST
 .........500.........510.........520.........530.........540.........550.........560
Sequence VLARPKLRPITGDDPARPREATIIYSGGDDVFVVGAWDDVIEFGIELRERFHEFTQGKLTVSAGIGMFPD
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Known secondary structure (DSSP) S



SSS

SS



STTTTTSS

T
 .........570.........580.........590.........600.........610.........620.........630
Sequence KYPISVMAREVGDLEDAAKSLPGKNGVALFDREFTFGWDELLSKVIEEKYRHIADYFSGNEERGMAFIYK
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Known secondary structure (DSSP) T

TSTT


SSS

TTTTTTTTT
SS
 .........640.........650.........660.........670....
Sequence LLEWVYFLTPFQQFANRLHQWFQDPTDAKQLKTALHLYIYRTRK
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Known secondary structure (DSSP)




SSSST


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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