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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c6ka5A_

Fold library idPDB HeaderMoleculeTitle
c6ka5A_1.59PDB header: hydrolaseChain: A: PDB Molecule: beta-lactamase;


Added to library: Sat Oct 19 08:42:55 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IDESKIKDTVDDLIQPLMQKNNIPGMSVAVTVNGKNYIYNYGLAAKQPQQPVTENTLFEVGSLSKTFAAT
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Known secondary structure (DSSP)
T

TTTT

TT
B
GGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence LASYAQVSGKLSLDQSVSHYVPELRGSSFDHVSVLNVGTHTSGLQLFMPEDIKNTTQLMAYLKAWKPADA
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Known secondary structure (DSSP) TTS

TTSB
GGGTTSGGGG
BTT
S


SS

TT

S


SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence AGTHRVYSNIGTGLLGMIAAKSLGVSYEDAIEKTLLPQLGMHHSYLKVPADQMENYAWGYNKKDEPVHVN
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Known secondary structure (DSSP) TTS


TTS
TTT
TTSS

GGGGGGB


TT




 .........220.........230.........240.........250.........260.........270.........280
Sequence MEILGNEAYGIKTTSSDLLRYVQANMGQLKLAKMQQALTATHTGYFKSGEITQDLMWEQLPYPVSLPNLL
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Known secondary structure (DSSP)

TT


TT
S


TT
TT
SS
SS

 .........290.........300.........310.........320.........330.........340.........350
Sequence TGNDMAMTKSVATPIVPPLPPQENVWINKTGSTNGFGAYIAFVPAKKMGIVMLANKNYSIDQRVTVAYKI
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Known secondary structure (DSSP) TS
SSS




SS
SS
GGGTSB


 ....
Sequence LSSL
Predicted secondary structure
SS confidence



Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg

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