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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c6k2cA_

Fold library idPDB HeaderMoleculeTitle
c6k2cA_2.70PDB header: oncoproteinChain: A: PDB Molecule: ubiquitin-protein ligase e3c;


Added to library: Sat Mar 7 08:39:29 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AAVPFEERVKIFQRLIYADKQEVQDGINVTIRRNYIYEDAYDKLSPENEPDLKKRIRVHLLNAIDGGGIF
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Known secondary structure (DSSP)

S





GGGT
TTT
S
TTS





S
 .........80.........90.........100.........110.........120.........130.........140
Sequence REFLNELLKSGFNPNQGFFKTTNEGLLYPNPAAQMLVGDSFARHYYFLGRMLGKALYENMLVELPFAGFF
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Known secondary structure (DSSP) TSGGGSS
SSS

TT
TTTT





B
 .........150.........160.........170.........180.........190.........200.........210
Sequence LSKLLGRLNRQIRQHCLAFRQGLANVVSLEWLRMFDQQEIQVLISGAQVPISLEDLKSFTNYSGGYSADH
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Known secondary structure (DSSP)


TTTTTTS
TTS



S


T
TT

TTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence PVIKVFWRVVEGFTDEEKRKLLKFVTSCSRPPLLGFKELYPAFCIHNGGSDLERLPTASTCMNLLKLPEF
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Known secondary structure (DSSP) T

S
SS

TT
GGG
SS



S
TTS

GGGT


 .........290........
Sequence YDETLLRSKLLYAIECAA
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Known secondary structure (DSSP)
S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Imperial College,
London
Michael Sternberg

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