PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6jo0A_

Fold library id	PDB Header	Molecule	Title
c6jo0A_	1.65	PDB header: membrane protein	Chain: A: PDB Molecule: virrdts;

Links to external resources
Added to library: Sat Oct 5 08:19:03 2019

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E N S F I V K N T M I F S F L I Q I I T L I I G I F A Q F I K V P R H K Y I L K D A L L L E N I V Q F I E A I F Y L W F I Y F Y K E N V D K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T
G G G T
S
T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I D I A K Y R Y Y D W F L T T P T M I L S V I I Y F H Y N N S S K K I Y Y N M I T F F K Q D F R K I L E L W F Y N F N M L I I G Y L Q E I N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S
S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I I S I L L S T L I G F Y F F G L L F Y K M F K Y Y V V Q N K K N Y L L F F L M F F I W G L Y G I A A L F N Y K F K N A F Y N I L D I F S K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T T T
G G G T T S
T

. . . . . . . . . 220 . . . .

Sequence N F F G L F L A Y L V F T G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	N	S	F	I	V	K	N	T	M	I	F	S	F	L	I	Q	I	I	T	L	I	I	G	I	F	A	Q	F	I	K	V	P	R	H	K	Y	I	L	K	D	A	L	L	L	E	N	I	V	Q	F	I	E	A	I	F	Y	L	W	F	I	Y	F	Y	K	E	N	V	D	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G																									T					G	G	G																											T			S		T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	D	I	A	K	Y	R	Y	Y	D	W	F	L	T	T	P	T	M	I	L	S	V	I	I	Y	F	H	Y	N	N	S	S	K	K	I	Y	Y	N	M	I	T	F	F	K	Q	D	F	R	K	I	L	E	L	W	F	Y	N	F	N	M	L	I	I	G	Y	L	Q	E	I	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																															S	S				S																																T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	I	S	I	L	L	S	T	L	I	G	F	Y	F	F	G	L	L	F	Y	K	M	F	K	Y	Y	V	V	Q	N	K	K	N	Y	L	L	F	F	L	M	F	F	I	W	G	L	Y	G	I	A	A	L	F	N	Y	K	F	K	N	A	F	Y	N	I	L	D	I	F	S	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S																									T	T	T		G	G	G																		T	T	S																	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Sequence	N	F	F	G	L	F	L	A	Y	L	V	F	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T