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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c6jmsA_

Fold library idPDB HeaderMoleculeTitle
c6jmsA_1.50PDB header: hydrolaseChain: A: PDB Molecule: pollen allergen cjp38;


Added to library: Sat May 9 08:20:30 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EQIGVNYGMDGNNLPSAGDVVSLMKKNNIGKMRIFGPNADVLRAFANSRIEVIVGVENKGLEAVASSQDS
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Known secondary structure (DSSP)






SS


TTSS

TTTS


GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence ANGWVNDNIKPFYPSTNIKYIAVGNEVLEMPDNAQYVSFLVPAIKNIQTALENANLQNNIKVSTAHAMTV
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Known secondary structure (DSSP) TGGGTTTSS
TT
GGGGGGGGGTT
TTT
GGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence IGTSSPPSKGTFKDAVKDSMSSILQFLQDHGSPFMANVYPYFSYDGDRSIKLDYALFNPTPPVVDEGLSY
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Known secondary structure (DSSP) BS

SSGGG

B
GGGT




TTS
T
S


TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence TNLFDAMVDAVLSAMESLGHPNIPIVITESGWPSAGKDVATIENAQTYNNNLIKHVLSNAGTPKRPGSSI
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Known secondary structure (DSSP)
STT
TT




SSSBTTBSSS
TTTS

 .........290.........300.........310.........320
Sequence ETYIFALFNENLKGPAEVEKHFGLFNPDEQPVYPVKFSLN
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Known secondary structure (DSSP)
S
SB

TT

SSGGGG


SB
TTS
BSS



S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Imperial College,
London
Michael Sternberg

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