PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6j9eC_

Fold library id	PDB Header	Molecule	Title
c6j9eC_	3.41	PDB header: transcription	Chain: C: PDB Molecule: dna-directed rna polymerase subunit beta;

Links to external resources
Added to library: Sat Jul 20 08:31:09 2019

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S Y S F T E K K R I R K D F G K Q R S I L E V P F L L A I Q V D S Y R E F L Q E D R K D L G L H A A L K S V F P I S S Y S G N A A L E Y V G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S
T T
S S S
B
S S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Y K L G Q P V F D E R E C R Q R G M S Y G A P L R V T V R L V I Y D R E S S T K A I K Y V K E Q E V Y L G E I P L M T G N G T F I V N G T E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T S
S
S S S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R V I V S Q L H R S P G V F F D H D R G K T H S S G K L L Y S A R I I P Y R G S W L D F E F D P K D A L F T R I D R R R K L P V S I L L R A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S S S T T S S
S S S
T T T
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence L G Y N N E E M L A E F F E I N T F H I V Q L E L V P E R L R G E A R H V K Q L E A A G V A A L A V P D D Y L V G R I L S H D V V D G S T G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
T T G G G T
T
B
T T T T T T S B
S
T T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence E L L A N A N D E I S E D Q L T A F R K A G V D A V G T L W V N D L D R G P Y L S N T L R I D P T K T Q L E A L V E I Y R M M R P G E P P T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S
B
T
S
S S S
S T T

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence K E A A Q N L F H N L F F T F E R Y D L S T V G R M K F N R R V G R K D V L G E S V L Y D K K Y F A E R N D E E S K R L V A E H T D T S D I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T T T
T
S
S S
T T T T T S
S S S

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence L E V I K V L T E I R N G R G V V D D I D H L G N R R V R S V G E M A E N V F R V G L V R V E R A V K E R L S M A L T P Q E L I N A K P V A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T S T T T
T S
G G G T

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence A A I K E F F G S S Q L S Q F M D Q N N P L S E V T H K R R V S A L G P G G L T R E R A G F E V R D V H P T H Y G R V C T I E T P E G P N I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S
S
S B S
S S S S
S S S
S
G G G T T T S S
S S S
S

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence G L I N S L A V F A R T N Q Y G F L E T P Y R K V L D G K V S D D V E Y L S A I E E N E Y V I A Q A N A L T D A K N M L T E Q F V P C R F Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
S S
S S S
S S S T T T T T T S
S
S S S S
S S S S

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence G E S L L K P P S E V H F M D V S P M Q T V S V A A A L V P F L E H D D A N R A L M G A N M Q R Q A V P T L R S Q K P L V G T G I E R A V A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T T S
S
G G G S S
T T T S S S S
G G G S
G G G
S S
S
S

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence R D S G V T V N A L R G G V I E Q I D A A R I V V K V N E A E I A G V D I Y N L I K Y T R S N Q N T C I N Q R P L V N V G D V I A R G D V L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S
S S
T T T
S
T T S
S S
T T

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence A D G P S T D I G E L A L G Q N M L I A F M P W N G Y N F E D S I L L S E R V V E E D R Y T T I H I E E L T C V A R D T K L G P E E I S A D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T B
S S S B
S S
T T T T S S S
S T T S S
B
S S
B
B
S

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence I P N V S E Q A L N R L D E S G V V Y I G A E V R A G D I M V G K V T P K G T P E E K L L R A I F G E K A S D V K D S S L R V P M D G T V I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
G G G T S S B
T T S B B
T T
B
T T
T T S
S S

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence D V Q V F T R D G I E K D K R A R Q I E E N E I K R V K K D F D D Q F R I L E A A I Y A R L R S Q I V G I E R A Q K Q I Q A H E K E F E A R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence F A D K R G K I T Q G D D L A P G V L K M V K V F L A V K R R I Q P G D K M A G R H G N K G V V S N V V P V E D M P Y M A T G E S V D I V L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T T
T T
B
S S S
G G G S
B
S S
B
S

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence N P L G V P S R M N I G Q I L E V H L G W A A K G L G R K I Q R M L E A Q A A V S E L R K F L D D I Y N H D Q R V D L S Q F S D E E L L N L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
S
S S S S
S

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence G K N L I D G V P M A T P V F D G A S E A E I K R M L E L A D L P Q S G Q T Q L Y D G R T G E A F D R K T T V G Y M H Y L K L N H L V D D K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S S S
T T
S S S
B
T T T
B
S S
S

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence M H A R S T G P Y S L V T Q Q P L G G K A Q F G G Q R F G E M E V W A L E A Y G A A Y T L Q E M L T V K S D D V Q G R N Q M Y K N I V D G E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
B
S S S S
B
S T G G G
S
T T T T T

. . . . . . . . . 1270 . . . . . . . . . 1280 . . . . . . . .

Sequence H E M V A G M P E S F N V L V K E I R S L A I H M E L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	Y	S	F	T	E	K	K	R	I	R	K	D	F	G	K	Q	R	S	I	L	E	V	P	F	L	L	A	I	Q	V	D	S	Y	R	E	F	L	Q	E	D	R	K	D	L	G	L	H	A	A	L	K	S	V	F	P	I	S	S	Y	S	G	N	A	A	L	E	Y	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S	S			S	S					T	T																		S	S									S			B		S	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	K	L	G	Q	P	V	F	D	E	R	E	C	R	Q	R	G	M	S	Y	G	A	P	L	R	V	T	V	R	L	V	I	Y	D	R	E	S	S	T	K	A	I	K	Y	V	K	E	Q	E	V	Y	L	G	E	I	P	L	M	T	G	N	G	T	F	I	V	N	G	T	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S																											T	T	S					S																		S	S	S					T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	V	I	V	S	Q	L	H	R	S	P	G	V	F	F	D	H	D	R	G	K	T	H	S	S	G	K	L	L	Y	S	A	R	I	I	P	Y	R	G	S	W	L	D	F	E	F	D	P	K	D	A	L	F	T	R	I	D	R	R	R	K	L	P	V	S	I	L	L	R	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S								S	S	S	S	T	T	S	S											S	S	S									T	T	T							S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	G	Y	N	N	E	E	M	L	A	E	F	F	E	I	N	T	F	H	I	V	Q	L	E	L	V	P	E	R	L	R	G	E	A	R	H	V	K	Q	L	E	A	A	G	V	A	A	L	A	V	P	D	D	Y	L	V	G	R	I	L	S	H	D	V	V	D	G	S	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T											S														T	T	G	G	G	T												T					B			T	T	T	T	T	T	S	B			S					T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	L	L	A	N	A	N	D	E	I	S	E	D	Q	L	T	A	F	R	K	A	G	V	D	A	V	G	T	L	W	V	N	D	L	D	R	G	P	Y	L	S	N	T	L	R	I	D	P	T	K	T	Q	L	E	A	L	V	E	I	Y	R	M	M	R	P	G	E	P	P	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S					S	S		B													T		S									S	S	S																													S	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	K	E	A	A	Q	N	L	F	H	N	L	F	F	T	F	E	R	Y	D	L	S	T	V	G	R	M	K	F	N	R	R	V	G	R	K	D	V	L	G	E	S	V	L	Y	D	K	K	Y	F	A	E	R	N	D	E	E	S	K	R	L	V	A	E	H	T	D	T	S	D	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S		T	T	T	T															T		S						S	S				T	T	T	T	T	S			S											S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	E	V	I	K	V	L	T	E	I	R	N	G	R	G	V	V	D	D	I	D	H	L	G	N	R	R	V	R	S	V	G	E	M	A	E	N	V	F	R	V	G	L	V	R	V	E	R	A	V	K	E	R	L	S	M	A	L	T	P	Q	E	L	I	N	A	K	P	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T						T	T	S	T	T	T																													T	S					G	G	G	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	A	I	K	E	F	F	G	S	S	Q	L	S	Q	F	M	D	Q	N	N	P	L	S	E	V	T	H	K	R	R	V	S	A	L	G	P	G	G	L	T	R	E	R	A	G	F	E	V	R	D	V	H	P	T	H	Y	G	R	V	C	T	I	E	T	P	E	G	P	N	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S		S	S							S										S	B			S		S	S	S	S			S	S	S							S			G	G	G	T	T	T			S	S				S	S	S		S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	G	L	I	N	S	L	A	V	F	A	R	T	N	Q	Y	G	F	L	E	T	P	Y	R	K	V	L	D	G	K	V	S	D	D	V	E	Y	L	S	A	I	E	E	N	E	Y	V	I	A	Q	A	N	A	L	T	D	A	K	N	M	L	T	E	Q	F	V	P	C	R	F	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S					S	S					S	S	S											S	S	S										T	T	T	T	T	T	S					S					S	S	S	S					S	S					S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	G	E	S	L	L	K	P	P	S	E	V	H	F	M	D	V	S	P	M	Q	T	V	S	V	A	A	A	L	V	P	F	L	E	H	D	D	A	N	R	A	L	M	G	A	N	M	Q	R	Q	A	V	P	T	L	R	S	Q	K	P	L	V	G	T	G	I	E	R	A	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S						T	T	S						S		G	G	G	S	S		T	T	T	S	S	S	S		G	G	G	S												G	G	G					S	S					S				S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	R	D	S	G	V	T	V	N	A	L	R	G	G	V	I	E	Q	I	D	A	A	R	I	V	V	K	V	N	E	A	E	I	A	G	V	D	I	Y	N	L	I	K	Y	T	R	S	N	Q	N	T	C	I	N	Q	R	P	L	V	N	V	G	D	V	I	A	R	G	D	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S				S	S									S	S								T	T	T												S				T	T	S											S	S					T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	A	D	G	P	S	T	D	I	G	E	L	A	L	G	Q	N	M	L	I	A	F	M	P	W	N	G	Y	N	F	E	D	S	I	L	L	S	E	R	V	V	E	E	D	R	Y	T	T	I	H	I	E	E	L	T	C	V	A	R	D	T	K	L	G	P	E	E	I	S	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	B		S	S	S	B			S								S			T	T	T	T	S	S	S						S					T	T	S	S														B		S	S		B		B			S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	I	P	N	V	S	E	Q	A	L	N	R	L	D	E	S	G	V	V	Y	I	G	A	E	V	R	A	G	D	I	M	V	G	K	V	T	P	K	G	T	P	E	E	K	L	L	R	A	I	F	G	E	K	A	S	D	V	K	D	S	S	L	R	V	P	M	D	G	T	V	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T			G	G	G	T	S	S	B		T	T	S	B	B		T	T		B			T	T																						T	T	S		S	S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	D	V	Q	V	F	T	R	D	G	I	E	K	D	K	R	A	R	Q	I	E	E	N	E	I	K	R	V	K	K	D	F	D	D	Q	F	R	I	L	E	A	A	I	Y	A	R	L	R	S	Q	I	V	G	I	E	R	A	Q	K	Q	I	Q	A	H	E	K	E	F	E	A	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	S																																								S
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	F	A	D	K	R	G	K	I	T	Q	G	D	D	L	A	P	G	V	L	K	M	V	K	V	F	L	A	V	K	R	R	I	Q	P	G	D	K	M	A	G	R	H	G	N	K	G	V	V	S	N	V	V	P	V	E	D	M	P	Y	M	A	T	G	E	S	V	D	I	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S						T	T																	T	T		B				S	S	S											G	G	G	S		B		S	S			B		S
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	N	P	L	G	V	P	S	R	M	N	I	G	Q	I	L	E	V	H	L	G	W	A	A	K	G	L	G	R	K	I	Q	R	M	L	E	A	Q	A	A	V	S	E	L	R	K	F	L	D	D	I	Y	N	H	D	Q	R	V	D	L	S	Q	F	S	D	E	E	L	L	N	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T						T																											S																							S	S	S	S		S
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	G	K	N	L	I	D	G	V	P	M	A	T	P	V	F	D	G	A	S	E	A	E	I	K	R	M	L	E	L	A	D	L	P	Q	S	G	Q	T	Q	L	Y	D	G	R	T	G	E	A	F	D	R	K	T	T	V	G	Y	M	H	Y	L	K	L	N	H	L	V	D	D	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S								S	S	S														T	T			S	S	S					B		T	T	T			B		S	S													S
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	M	H	A	R	S	T	G	P	Y	S	L	V	T	Q	Q	P	L	G	G	K	A	Q	F	G	G	Q	R	F	G	E	M	E	V	W	A	L	E	A	Y	G	A	A	Y	T	L	Q	E	M	L	T	V	K	S	D	D	V	Q	G	R	N	Q	M	Y	K	N	I	V	D	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S			B		S	S	S	S		B			S	T	G	G	G																S											T	T	T	T	T
	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.
Sequence	H	E	M	V	A	G	M	P	E	S	F	N	V	L	V	K	E	I	R	S	L	A	I	H	M	E	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T	T	T