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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c6j20A_

Fold library idPDB HeaderMoleculeTitle
c6j20A_2.70PDB header: membrane proteinChain: A: PDB Molecule: substance-p receptor,endolysin;


Added to library: Sat Mar 9 09:29:22 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FVQPAWQIVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFANASMAAFNTVVNFTYAV
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Known secondary structure (DSSP)



SSS

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence HNEWYYGLFYCKFHNFFPIAAVFASIWSMTAVAFDRYMAIIHPLQPRLSATATKVVICVIWVLALLLAFP
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Known secondary structure (DSSP) S


S
TTS



 .........150.........160.........170.........180.........190.........200.........210
Sequence QGYYSTTETMPSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGIRLWASNIFEMLRI
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Known secondary structure (DSSP) T
SS





SS
T


 .........220.........230.........240.........250.........260.........270.........280
Sequence DEDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDE
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TT
TTTS
TT
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence AAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLPYI
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Known secondary structure (DSSP) TTS
SSSGGGS
SS
 .........360.........370.........380.........390........
Sequence NPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRFRLGFKHAFR
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Known secondary structure (DSSP)
S

S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Imperial College,
London
Michael Sternberg

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