PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6isbB_

Fold library id	PDB Header	Molecule	Title
c6isbB_	2.50	PDB header: immune system	Chain: B: PDB Molecule: cd226 antigen;

Links to external resources
Added to library: Sat Dec 29 08:46:11 2018

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V L W H T S V P F A E N M S L E C V Y P S M G I L T Q V E W F K I G T Q Q D S I A I F S P T H G M V I R K P Y A E R V Y F L N S T M A S N N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
B
S S S S T T T
G G G T T T
S
T T T B

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence M T L F F R N A S E D D V G Y Y S C S L Y T Y P Q G T W Q K V I Q V V Q S D S F E A A V P S N S H I V S E P G K N V T L T C Q P Q M T W P V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
G G G
T T
S S
S G G G
S
T T
S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Q A V R W E K I Q P R Q I D L L T Y C N L V N F T S K F P R Q I V S N C S H G R W S V I V I P D V T V S D S G L Y R C Y L Q A S A G E N E T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T
B
S S S G G G
S
G G G
S S S

. . . . . . . .

Sequence F V M R L T V A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	L	W	H	T	S	V	P	F	A	E	N	M	S	L	E	C	V	Y	P	S	M	G	I	L	T	Q	V	E	W	F	K	I	G	T	Q	Q	D	S	I	A	I	F	S	P	T	H	G	M	V	I	R	K	P	Y	A	E	R	V	Y	F	L	N	S	T	M	A	S	N	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S							T	T						B					S											S	S	S									T	T	T						G	G	G	T	T	T						S			T	T	T	B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	M	T	L	F	F	R	N	A	S	E	D	D	V	G	Y	Y	S	C	S	L	Y	T	Y	P	Q	G	T	W	Q	K	V	I	Q	V	V	Q	S	D	S	F	E	A	A	V	P	S	N	S	H	I	V	S	E	P	G	K	N	V	T	L	T	C	Q	P	Q	M	T	W	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S			G	G	G												T	T												S	S		S	G	G	G				S							T	T											S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	A	V	R	W	E	K	I	Q	P	R	Q	I	D	L	L	T	Y	C	N	L	V	N	F	T	S	K	F	P	R	Q	I	V	S	N	C	S	H	G	R	W	S	V	I	V	I	P	D	V	T	V	S	D	S	G	L	Y	R	C	Y	L	Q	A	S	A	G	E	N	E	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S	S																		T	T			B				S	S	S	G	G	G						S			G	G	G											S	S	S
	.	.	.	.	.	.	.	.
Sequence	F	V	M	R	L	T	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)