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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c6id1U_

Fold library idPDB HeaderMoleculeTitle
c6id1U_2.86PDB header: splicingChain: U: PDB Molecule: cwf19-like protein 2;


Added to library: Sat Mar 16 08:34:59 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SGVENEDQQEVILVRTDQSGRVWPVNTKRQMVSTHEERERVRYFHDDDNLSLNDLVKNEKMGTAENQNKL
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BSSSSB

SSTTTTT



S
SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence FMRMASKFMGKTDGDYYTLDDMFVSKAAERERLGEEEENQRKKAIAEHRSLAAQMEKCLYCFDSSQFPKH
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Known secondary structure (DSSP) TSTTS



SSSS
ST



SSSTS
SSSSSSSS


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence LIVAIGVKVYLCLPNVRSLTEGHCLIVPLQHHRAATLLDEDIWEEIQMFRKSLVKMFEDKGLDCIFLETN
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Known secondary structure (DSSP) S




SS

SBS
SSTT
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TT


 .........220.........230.........240.........250.........260.........270.........280
Sequence MSMKKQYHMVYECIPLPKEVGDMAPIYFKKAIMESDEEWSMNKKLIDLSSKDIRKSVPRGLPYFSVDFGL
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TTS






TSTSS
SS
SS
S

SSS
STTTS
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TT
 .........290.........300.........310.........320.........330.........340.......
Sequence HGGFAHVIEDQHKFPHYFGKEIIGGMLDIEPRLWRKGIRESFEDQRKKALQFAQWWKPYDFTKSKNY
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Known secondary structure (DSSP)


STTSS
SS
TT

TTTTSS

B

TTTTTTTSSTT

S





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Imperial College,
London
Michael Sternberg

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