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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c6humD_

Fold library idPDB HeaderMoleculeTitle
c6humD_3.34PDB header: proton transportChain: D: PDB Molecule: nad(p)h-quinone oxidoreductase chain 4 1;


Added to library: Sat Jan 12 08:37:19 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence WLTTIILFPIVAALAIPFIPTGKGRPIRWYALAVGLIDFALIVYAFTNFYDPGMQLWESYDWIPEIGLRW
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Known secondary structure (DSSP)
TTTTS


SSS
TTT





S



SBTTTTB

 .........80.........90.........100.........110.........120.........130.........140
Sequence SVGADGLSMPLILLTGFITTLAILAAWPVTLKPRLFYFLMLAMYGGQIAVFAVQDMLVFFLAWELELIPV
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Known secondary structure (DSSP)


TTTTT
TT

SSTTTS


TTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence YLLLAIWGGHKRQYAATKFILYTAGSSLFILVAGLAMAFYGDTVSFDMQTLAAKDYALGFQLLVYAGFLV
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Known secondary structure (DSSP) TSS
SSTSSTSSS



SSS


 .........220.........230.........240.........250.........260.........270.........280
Sequence AYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALIRMNVDMLPAAHAKFAPVLVILGVVNII
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Known secondary structure (DSSP) TTTTT
SSTTTSS
TTSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence YAALTSYAQRNLKRKIAYSSISHIGFVLIGIASFTNLGMSGAVLQMVSHGLIGASLFFLVGATYDRTHTL
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Known secondary structure (DSSP)

SSTSS
STTS

 .........360.........370.........380.........390.........400.........410.........420
Sequence ILEEMGGVGQKMKKIFAMFTACSLASLALPGMSGFVAELMVFIGFATSPFRVIVVFLAAVGVILTPIYLL
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Known secondary structure (DSSP)
STT


GGGTSTTS

TTS


TTT
 .........430.........440.........450.........460.........470.........480........
Sequence SMLREIFYGPENKELVEHEALVDAEPREVFIIACLLVPIIGIGLYPKLLTQIYDATTGQVIARAREVL
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Known secondary structure (DSSP) TSSS


TT

S



S

STTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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