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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c6humA_

Fold library idPDB HeaderMoleculeTitle
c6humA_3.34PDB header: proton transportChain: A: PDB Molecule: nad(p)h-quinone oxidoreductase subunit 1;


Added to library: Sat Jan 12 08:18:37 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence IDLQGQFISALQSLGLSHDLAKLLWLPLPMLMMLIVATVGVLVAVWLERKISAAVQQRIGPEYIGPLGIL
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Known secondary structure (DSSP)

T
S
TTTTT




SSSSSSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence APLADGLKLIFKEDVLPANSDRWLFTLGPAVVVIPVFLSYIIVPFGQNLLISNLAMGVFLWIALSSIAPI
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Known secondary structure (DSSP) S




SS

TTGGGS

SSTT
SS


SSTGGG
 .........150.........160.........170.........180.........190.........200.........210
Sequence GLLMAGYASNNKYSLLGGLRAAAQSISYEIPLALAVLAVAMMSNGLGTVEIVEQQSQWNVWRQPIGFLVF
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Known secondary structure (DSSP) SSS
TTTTTSSTSSS
T




TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence WIAALAECERLPFDLPEAEEELVAGYQTEYAGMKFALFYLGAYVNLVLSALLVSVLYFGGWSFPIPLETI
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Known secondary structure (DSSP) TTTTSTTS
GGG
TTTSTTGGGTT

ST
SS

SS
TT

 .........290.........300.........310.........320.........330.........340.........350
Sequence NPFLQIAFAVLGITMTLIKAYFFVFLAILLRWTVPRVRIDQLLDLGWKFLLPVGLVNLLLTAGLKLAFPV
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Known secondary structure (DSSP)
TT




STTTTTT

T
 ..
Sequence AF
Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Imperial College,
London
Michael Sternberg

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