PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6h7wO_

Fold library id	PDB Header	Molecule	Title
c6h7wO_	11.40	PDB header: protein transport	Chain: O: PDB Molecule: putative vacuolar protein sorting-associated protein;

Links to external resources
Added to library: Sat Sep 29 08:28:49 2018

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence N K F V E Q D D W F H D R R V Y L D A L E N Q L K A L L K A M D N M V A Q R K A M A E A A A D F S A S L H A L S T V E L S P T L S G P L D A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L S E L Q L A I R D V Y E R Q A Q Q D V L T F G I I I E E Y I R L I G S V K Q A F S Q R Q K A F H S W H S A E S E L M K K K A A Q D K L L R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Q G K T Q Q D R L N Q V N A E V I D A E R K V H Q A R L L F E D M G R L L R S E L D R F E R E K V E D F K S G V E T F L E S A V E A Q K E L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S

. . . . . . . . . 220

Sequence I E K W E T F L M Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	K	F	V	E	Q	D	D	W	F	H	D	R	R	V	Y	L	D	A	L	E	N	Q	L	K	A	L	L	K	A	M	D	N	M	V	A	Q	R	K	A	M	A	E	A	A	A	D	F	S	A	S	L	H	A	L	S	T	V	E	L	S	P	T	L	S	G	P	L	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																																						T	T	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	S	E	L	Q	L	A	I	R	D	V	Y	E	R	Q	A	Q	Q	D	V	L	T	F	G	I	I	I	E	E	Y	I	R	L	I	G	S	V	K	Q	A	F	S	Q	R	Q	K	A	F	H	S	W	H	S	A	E	S	E	L	M	K	K	K	A	A	Q	D	K	L	L	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T																																																				T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	G	K	T	Q	Q	D	R	L	N	Q	V	N	A	E	V	I	D	A	E	R	K	V	H	Q	A	R	L	L	F	E	D	M	G	R	L	L	R	S	E	L	D	R	F	E	R	E	K	V	E	D	F	K	S	G	V	E	T	F	L	E	S	A	V	E	A	Q	K	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S
	.	.	.	.	.	.	.	.	.	220
Sequence	I	E	K	W	E	T	F	L	M	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)