PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6h3zB_

Fold library id	PDB Header	Molecule	Title
c6h3zB_	3.00	PDB header: gene regulation	Chain: B: PDB Molecule: ccr4-not transcription complex subunit 1;

Links to external resources
Added to library: Sat Nov 10 08:24:38 2018

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L N Q I D S R A V A E R I N K Y L E Q L T A A A T S A T E E H F N E L P R P H A V L D I I D A L I Q L I I K A Q Q T S E E F A I Y A L Q Q I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S T T
S S
T T
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S Q L L F R Q P E G T L L L E S L V H V L E T I R K I A G P Q V S E Q V R Q L F H Q Q P G H L F L S L S L I A A L L G T D L L D W K N I D M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T T S
G G G G
T T S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . .

Sequence A M A K A L E Q R K E G S I D F L E Q L M D L V L L N D T P L A L F T D F V R S L E A A W A W I V E D P D L P A A Q R F K A K V R A Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T T S S S S
S S
G G G G
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	N	Q	I	D	S	R	A	V	A	E	R	I	N	K	Y	L	E	Q	L	T	A	A	A	T	S	A	T	E	E	H	F	N	E	L	P	R	P	H	A	V	L	D	I	I	D	A	L	I	Q	L	I	I	K	A	Q	Q	T	S	E	E	F	A	I	Y	A	L	Q	Q	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																											S	S			S	S	T	T			S	S																			T	T		T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	Q	L	L	F	R	Q	P	E	G	T	L	L	L	E	S	L	V	H	V	L	E	T	I	R	K	I	A	G	P	Q	V	S	E	Q	V	R	Q	L	F	H	Q	Q	P	G	H	L	F	L	S	L	S	L	I	A	A	L	L	G	T	D	L	L	D	W	K	N	I	D	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T																						T													T	T	S		G	G	G	G										T	T	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Sequence	A	M	A	K	A	L	E	Q	R	K	E	G	S	I	D	F	L	E	Q	L	M	D	L	V	L	L	N	D	T	P	L	A	L	F	T	D	F	V	R	S	L	E	A	A	W	A	W	I	V	E	D	P	D	L	P	A	A	Q	R	F	K	A	K	V	R	A	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T		T	T													T	S	S	S	S		S	S		G	G	G	G																												T	T