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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c6fopA_

Fold library idPDB HeaderMoleculeTitle
c6fopA_1.40PDB header: hydrolaseChain: A: PDB Molecule: glycoside hydrolase family 81;


Added to library: Sat Mar 16 08:48:11 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QYYREGTGSYTVVLPPGAKVPQAEIYKTSNLQGAVPTNSWESSILWNQYSLPIYAHPLTFKFKAEGIEVG
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Known secondary structure (DSSP)
TTSS

TT


S
S


B
TT

SS


SSTTTSSS
S

SS
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence KPALGGSGIAYFGAHKNDFTVGHSSVYTFPDARADKISDFAVDAVMASGSGSIKATLMKGSPYAYFVFTG
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Known secondary structure (DSSP)



B

BS




SSS



S


SSTTTT
SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence GNPRIDFSGTPTVFYGDSGSQCLGVTINGVNYGLFAPSGSKWQGIGTGTITCILPAGKNYFSIAVLPDNT
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Known secondary structure (DSSP) S
SS



TT
STT

TT

TTSS

TT

SS

 .........220.........230.........240.........250.........260.........270.........280
Sequence VSTLTYYKDYAYCFVTDTKVEWSYNETESTLTTTFTAEVSVKEGTNKGTILALYPHQWRNNPHILPLPYT
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Known secondary structure (DSSP) TTTTTT
SSS




TT
TT



S
 .........290.........300.........310.........320.........330.........340.........350
Sequence YSTLRGIMKTIQGTSFKTVYRYHGILPNLPDKGTYDREALNRYINELALQADAPVAVDTYWFGKHLGKLS
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Known secondary structure (DSSP) TTSS


B
SS

S


S
TTT

S

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence CALPIAEQLGNISAKDRFISFMKSSLEDWFTAKEGETAKLFYYDSNWGTLIGYPSSYGSDEELNDHHFHY
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Known secondary structure (DSSP) T
T


TT

SSTTTTS

TTTTTS


 .........430.........440.........450.........460.........470.........480.........490
Sequence GYFLHAAAQIALRDPQWASRDNWGAMVELLIKDIANWDRNDTRFPFLRNFDPYEGHSWASGHAGFADGNN
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Known secondary structure (DSSP)
STTTTB

TT
TTS
BTSSTTTT


SS

STT

 .........500.........510.........520.........530.........540.........550.........560
Sequence QASSSEAINAWQAIILWGEATGNKTIRDLGIYLYTTEVEAVCNYWFDLYKDIFSPSYGHNYASMVWGGKY
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Known secondary structure (DSSP) S
T
TT
TTS
SS
TTB

S

SSS
 .........570.........580.........590.........600.........610.........620.........630
Sequence CHEIWWNGTNSEKHGINFLPITAASLYLGKDPNYIKQNYEEMLRECGTSQPPNWKDIQYMYYALYDPAAA
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Known secondary structure (DSSP) S

SS


TTT
S

TTGGGGGSSTSSS
SS
TTT
 .........640.........650.........660.........670.........680.........690.........700
Sequence KNMWNESIVPEDGESKAHTYHWICNLDSLGLPDFSVTADTPLYSVFNKNNIRTYVVYNASSSAKKVTFSD
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Known secondary structure (DSSP)

TTS


TT



TT

BSSSBTT
SSS
BTT
 .........710.......
Sequence GKVMTVGPHSMAVSTGS
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Known secondary structure (DSSP) S

TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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London
Michael Sternberg

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