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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c6f2oA_ | 3.00 | PDB header: cell adhesion | Chain: A: PDB Molecule: leucine-rich repeat and fibronectin type-iii domain- |
Added to library: Sat Jun 30 09:15:33 2018 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | F | Q | I | C | P | K | R | C | V | C | Q | I | L | S | P | N | L | A | T | L | C | A | K | K | G | L | L | F | V | P | P | N | I | D | R | R | T | V | E | L | R | L | A | D | N | F | V | T | N | I | K | R | K | D | F | A | N | M | T | S | L | V | D | L | T | L | S | R | N | T |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | T | T | B | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | S | S | T | T | T | T | S | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | G | G | G | G | T | T | S | S | ![]() | ![]() | ![]() | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | I | S | F | I | T | P | H | A | F | A | D | L | R | N | L | R | A | L | H | L | N | S | N | R | L | T | K | I | T | N | D | M | F | S | G | L | S | N | L | H | H | L | I | L | N | N | N | Q | L | T | L | I | S | S | T | A | F | D | D | V | F | A | L | E | E | L | D | L | S | Y |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | T | T | T | T | T | T | T | T | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | T | T | T | T | T | T | T | T | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | G | G | G | G | S | S | T | T | S | ![]() | ![]() | ![]() | S |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | N | N | L | E | T | I | P | W | D | A | V | E | K | M | V | S | L | H | T | L | S | L | D | H | N | M | I | D | N | I | P | K | G | T | F | S | H | L | H | K | M | T | R | L | D | V | T | S | N | K | L | Q | K | L | P | P | D | P | L | A | L | S | F | G | G | N | P | L | H | C |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | ![]() | ![]() | ![]() | ![]() | T | T | S | S | ![]() | ![]() | ![]() | S | S | S | S | T | T | S | S | S | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | T | T | B |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 |
Sequence | N | C | E | L | L | W | L | R | R | L | S | R | E | D | D | L | E | T | C | A | S | P | A | L | L | T | G | R | Y | F | W | S | I | P | F | L | C | E | P | P | L | I | T | R | H | T | H | E | M | R | V | L | E | G | Q | R | A | T | L | R | C | K | A | R | G | D | P | E | P | A |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | S | B | B | S | T | T | T | S | S | S | B | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | ![]() |   | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 |
Sequence | I | H | W | I | S | P | E | G | K | L | I | L | V | Y | D | N | G | T | L | D | I | L | I | T | T | V | K | D | T | G | A | F | T | C | I | A | S | N | P | A | G | E | A | T | Q | T | V | D | L | H | ||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | T | T | T | ![]() | ![]() | ![]() | ![]() | T | T | G | G | G | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |
Download: | PDB structure | FASTA sequence |
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