PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6f2dE_

Fold library id	PDB Header	Molecule	Title
c6f2dE_	4.20	PDB header: protein transport	Chain: E: PDB Molecule: flagellar biosynthetic protein flip;

Links to external resources
Added to library: Sat Jul 7 08:27:24 2018

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Q T L V F I T S L T F L P A I L L M M T S F T R I I I V F G L L R N A L G T P S A P P N Q V L L G L A L F L T F F I M S P V I D K I Y V D A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S S S S S
S
T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Y Q P F S E Q K I S M Q E A L D K G A Q P L R A F M L R Q T R E A D L A L F A R L A N S G P L Q G P E A V P M R I L L P A Y V T S E L K T A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S S
S S S
S T T
T T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . .

Sequence F Q I G F T I F I P F L I I D L V I A S V L M A L G M M M V P P A T I A L P F K L M L F V L V D G W Q L L V G S L A Q S F Y S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T S
T T T T T T
T T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	T	L	V	F	I	T	S	L	T	F	L	P	A	I	L	L	M	M	T	S	F	T	R	I	I	I	V	F	G	L	L	R	N	A	L	G	T	P	S	A	P	P	N	Q	V	L	L	G	L	A	L	F	L	T	F	F	I	M	S	P	V	I	D	K	I	Y	V	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T	S	S													S	S	S	S			S		T	T	T																									T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Y	Q	P	F	S	E	Q	K	I	S	M	Q	E	A	L	D	K	G	A	Q	P	L	R	A	F	M	L	R	Q	T	R	E	A	D	L	A	L	F	A	R	L	A	N	S	G	P	L	Q	G	P	E	A	V	P	M	R	I	L	L	P	A	Y	V	T	S	E	L	K	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	S	S			S	S																		S		S										T	T							T	T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Sequence	F	Q	I	G	F	T	I	F	I	P	F	L	I	I	D	L	V	I	A	S	V	L	M	A	L	G	M	M	M	V	P	P	A	T	I	A	L	P	F	K	L	M	L	F	V	L	V	D	G	W	Q	L	L	V	G	S	L	A	Q	S	F	Y	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																										T		T	T	S		T	T	T	T											T	T		T											T	T	T