PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6eqtA_

Fold library id	PDB Header	Molecule	Title
c6eqtA_	2.74	PDB header: dna binding protein	Chain: A: PDB Molecule: centromere protein n;

Links to external resources
Added to library: Sat Jan 20 10:21:44 2018

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M D E T V A E F I K R T I L K I P M N E L T T I L K A W D F L S E N Q L Q T V N F R Q R K E S V V Q H L I H L C E E K R A S I S D A A L L D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T
S
T
S S
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I I Y M Q F H Q H Q K V W D V F Q M S K D L F D M K Q F K N S F K K I L Q R A L K N V T V S F R E T E E N A V W I R I A W G T Q Y T K P N Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
G G G S
S
S S S T T T
S S S
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . .

Sequence Y K P T Y V V Y Y S Q T P Y A F T S S S M L R R N T P L L G Q A L T I A S K H H Q I V K M D L R S R Y L D S L K A I V F K Q Y N Q T F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
T T S S
S S
T T T T
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	D	E	T	V	A	E	F	I	K	R	T	I	L	K	I	P	M	N	E	L	T	T	I	L	K	A	W	D	F	L	S	E	N	Q	L	Q	T	V	N	F	R	Q	R	K	E	S	V	V	Q	H	L	I	H	L	C	E	E	K	R	A	S	I	S	D	A	A	L	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																S													T		S							T				S	S																	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	I	Y	M	Q	F	H	Q	H	Q	K	V	W	D	V	F	Q	M	S	K	D	L	F	D	M	K	Q	F	K	N	S	F	K	K	I	L	Q	R	A	L	K	N	V	T	V	S	F	R	E	T	E	E	N	A	V	W	I	R	I	A	W	G	T	Q	Y	T	K	P	N	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T		G	G	G	S												S																	S	S	S									T	T	T											S	S	S				T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Sequence	Y	K	P	T	Y	V	V	Y	Y	S	Q	T	P	Y	A	F	T	S	S	S	M	L	R	R	N	T	P	L	L	G	Q	A	L	T	I	A	S	K	H	H	Q	I	V	K	M	D	L	R	S	R	Y	L	D	S	L	K	A	I	V	F	K	Q	Y	N	Q	T	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S								T	T	S	S							S	S			T	T												T	T		S										S