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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c6e8jA_

Fold library idPDB HeaderMoleculeTitle
c6e8jA_3.09PDB header: transport proteinChain: A: PDB Molecule: major facilitator family transporter;


Added to library: Sat Aug 17 09:11:30 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GSKPYRSYVLLALTLIYTLNFIDRTVITVVAQPIINTFSLSDAQWGLLTGPPFALFYALMGIPIAMWADR
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Known secondary structure (DSSP)

TTTTTTT

SGGGGTTTTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence GNRVFIISLCVIIWSIMTVFCGLAASFIWLLLFRVGVAIGEAGCTPPANSIITDYYPPKSRANAIGIYSM
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Known secondary structure (DSSP) S

TT

STTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence GVTVGGVMAQLFGGALAGLQGADFGNFLSSIGLGWLFSGINWEEVEGWRLVFVIVGAPGILVALILWLTT
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Known secondary structure (DSSP) TT

TT
TT

GGG

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence REPPRGYSDPKREFGAKPTFWSLSLGAAFVAFVGYGLISFQAPFLMRVHGVSVSEAAIRYGAPLAAVAAF
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Known secondary structure (DSSP)



TT





GGGG



TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence GTFLGGFLSEKFTPRFPAIVAWLPGVGLLIAIPAYIAAFLTPSLTMAFWMWVIAAIAHYAYLGAQYTVST
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Known secondary structure (DSSP) S
SS

S

SSSTT
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence AIVSPRSRATTVSVLLLIVSLIGNGLGPMFTGMMSSAFMGGIIRKNGLEEAFATFNPGLCAGRMAEIGEM
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Known secondary structure (DSSP) TTS
GGGT
TT

GGGGGT

GGG
TT
 .........430.........440.........450.........460.....
Sequence GPALCSAYAEGLRQSMVATVVFLVIAAAFYFLASRTFLKDRWSPA
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Known secondary structure (DSSP)





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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