PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6dq3B_

Fold library id	PDB Header	Molecule	Title
c6dq3B_	1.78	PDB header: hydrolase	Chain: B: PDB Molecule: polysaccharide deacetylase;

Links to external resources
Added to library: Sat May 4 08:20:58 2019

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T P V K I P I L M Y H A I H V M S P E E T A N A N L I V N P D L F D Q Q L Q K M K D E G Y Y F L S P E E V Y R A L S N N E L P A K K V V W L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B S
T T G G G S
B
T T
T
S S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T F D D S M I D F Y N V A Y P I L K K Y D A K A T N N V I T G L T E M G S A A N L T L K Q M K E M K Q V G M S F Q D H T V N H P D L E Q A S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
B T T T
T T
T T B
T T T
S S
G G G S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence P D V Q T T E M K D S K D Y L D K Q L N Q N T I A I A Y P S G R Y N D T T L Q I A A R L N Y K L G V T T N E G I A S A A N G L L S L N R I R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
G G G
T T
S
G G G
T T S

. . . . . . . . . 220 . . . . . .

Sequence I L P N M S P E N L L Q T M E P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	P	V	K	I	P	I	L	M	Y	H	A	I	H	V	M	S	P	E	E	T	A	N	A	N	L	I	V	N	P	D	L	F	D	Q	Q	L	Q	K	M	K	D	E	G	Y	Y	F	L	S	P	E	E	V	Y	R	A	L	S	N	N	E	L	P	A	K	K	V	V	W	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													B	S				T	T	G	G	G	S					B															T	T																T			S	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	F	D	D	S	M	I	D	F	Y	N	V	A	Y	P	I	L	K	K	Y	D	A	K	A	T	N	N	V	I	T	G	L	T	E	M	G	S	A	A	N	L	T	L	K	Q	M	K	E	M	K	Q	V	G	M	S	F	Q	D	H	T	V	N	H	P	D	L	E	Q	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S		B						T								T	T														T	T		T	T	B											T	T	T								S	S				G	G	G	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	D	V	Q	T	T	E	M	K	D	S	K	D	Y	L	D	K	Q	L	N	Q	N	T	I	A	I	A	Y	P	S	G	R	Y	N	D	T	T	L	Q	I	A	A	R	L	N	Y	K	L	G	V	T	T	N	E	G	I	A	S	A	A	N	G	L	L	S	L	N	R	I	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T	S								G	G	G													T	T										S				G	G	G		T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Sequence	I	L	P	N	M	S	P	E	N	L	L	Q	T	M	E	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T										T