PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6djlE_

Fold library id	PDB Header	Molecule	Title
c6djlE_	3.10	PDB header: signaling protein/protein transport	Chain: E: PDB Molecule: sh3 domain-binding protein 5;

Links to external resources
Added to library: Sat Sep 29 08:37:30 2018

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E E V D P R I Q G E L E K L N Q S T D D I N R R E T E L E D A R Q K F R S V L V E A T V K L D E L V K K I G K A V E D S K P Y W E A R R V A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R Q A Q L E A Q K A T Q D F Q R A T E V L R A A K E T I S L A E Q R L L E D D K R Q F D S A W Q E M L N H A T Q R V M E A E Q T K T R S E L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V H K E T A A R Y N A A M G R M R Q L E K K L K R A I N K S K P Y F E L K A K Y Y V Q L E Q L K K T V D D L Q A K L T L A K G E Y K M A L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S

. . . . . . . . . 220 . . . . . .

Sequence N L E M I S D E I H E R R R S S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	E	V	D	P	R	I	Q	G	E	L	E	K	L	N	Q	S	T	D	D	I	N	R	R	E	T	E	L	E	D	A	R	Q	K	F	R	S	V	L	V	E	A	T	V	K	L	D	E	L	V	K	K	I	G	K	A	V	E	D	S	K	P	Y	W	E	A	R	R	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T																																																		T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	Q	A	Q	L	E	A	Q	K	A	T	Q	D	F	Q	R	A	T	E	V	L	R	A	A	K	E	T	I	S	L	A	E	Q	R	L	L	E	D	D	K	R	Q	F	D	S	A	W	Q	E	M	L	N	H	A	T	Q	R	V	M	E	A	E	Q	T	K	T	R	S	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																							G	G	G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	H	K	E	T	A	A	R	Y	N	A	A	M	G	R	M	R	Q	L	E	K	K	L	K	R	A	I	N	K	S	K	P	Y	F	E	L	K	A	K	Y	Y	V	Q	L	E	Q	L	K	K	T	V	D	D	L	Q	A	K	L	T	L	A	K	G	E	Y	K	M	A	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Sequence	N	L	E	M	I	S	D	E	I	H	E	R	R	R	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)