PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6cr1L_

Fold library id	PDB Header	Molecule	Title
c6cr1L_	1.52	PDB header: immune system	Chain: L: PDB Molecule: light chain of adalimumab efab (vl-ige ch2);

Links to external resources
Added to library: Sat Sep 29 08:55:31 2018

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D I Q M T Q S P S S L S A S V G D R V T I T C R A S Q G I R N Y L A W Y Q Q K P G K A P K L L I Y A A S T L Q S G V P S R F S G S G S G T D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
S S
T T
T T S
T T T
T T
T T S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence F T L T I S S L Q P E D V A T Y Y C Q R Y N R A P Y T F G Q G T K V E I K R T V A A P T V K I L Q S S C D G G G H F P P T I Q L L C L V S G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
G G G
S S S
B
T T S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Y T P G T I Q I T W L E D G Q V M D V D L S T A S T T Q E G E L A S T Q S E L T L S Q K H W L S D R T Y T C Q V T Y Q G H T F E D S G K K C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T
G G G T T T
T T

.

Sequence A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	I	Q	M	T	Q	S	P	S	S	L	S	A	S	V	G	D	R	V	T	I	T	C	R	A	S	Q	G	I	R	N	Y	L	A	W	Y	Q	Q	K	P	G	K	A	P	K	L	L	I	Y	A	A	S	T	L	Q	S	G	V	P	S	R	F	S	G	S	G	S	G	T	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S						T	T										S	S			T	T									T	T	S								T	T	T				T	T			T	T						S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	T	L	T	I	S	S	L	Q	P	E	D	V	A	T	Y	Y	C	Q	R	Y	N	R	A	P	Y	T	F	G	Q	G	T	K	V	E	I	K	R	T	V	A	A	P	T	V	K	I	L	Q	S	S	C	D	G	G	G	H	F	P	P	T	I	Q	L	L	C	L	V	S	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S			G	G	G										S	S	S				B																										T	T	S				S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Y	T	P	G	T	I	Q	I	T	W	L	E	D	G	Q	V	M	D	V	D	L	S	T	A	S	T	T	Q	E	G	E	L	A	S	T	Q	S	E	L	T	L	S	Q	K	H	W	L	S	D	R	T	Y	T	C	Q	V	T	Y	Q	G	H	T	F	E	D	S	G	K	K	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S									T	T					G	G	G									T	T																	T											T	T
	.
Sequence	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)