PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6bqzA_

Fold library id	PDB Header	Molecule	Title
c6bqzA_	2.30	PDB header: ligase	Chain: A: PDB Molecule: tyrosine--trna ligase;

Links to external resources
Added to library: Sat Dec 16 08:23:46 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence H H H L P A E E Q L A L I Q R G T H E I I S E E D L L K K L K E N R P L K I K A G F D P T A P D L H L G H T V L I N K L K T F Q D L G H E V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
S T T
S
T T S S S
G G G T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T F L I G D Y T A M I G D P T R P P L S R E Q V E A N A K T Y Q E Q V F K I L D P N K T K V R F N S E W F N Q K S A A D L I Q L A S Q Q T V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
T T T S
G G G T T T
T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S R M L E R D D F T K R Y N N H Q P I A I H E F L Y P L V Q G Y D S I A L E A D V E L G G T D Q T F N L L M G R T L Q S R Y G Q E S Q V C I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S T T
T T
S G G G T T

. . . . . .

Sequence T V P I L Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg
Disclaimer

Terms and Conditions

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	H	H	H	L	P	A	E	E	Q	L	A	L	I	Q	R	G	T	H	E	I	I	S	E	E	D	L	L	K	K	L	K	E	N	R	P	L	K	I	K	A	G	F	D	P	T	A	P	D	L	H	L	G	H	T	V	L	I	N	K	L	K	T	F	Q	D	L	G	H	E	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S												T	T		S				T										T		S										T	T	S	S	S			G	G	G													T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	F	L	I	G	D	Y	T	A	M	I	G	D	P	T	R	P	P	L	S	R	E	Q	V	E	A	N	A	K	T	Y	Q	E	Q	V	F	K	I	L	D	P	N	K	T	K	V	R	F	N	S	E	W	F	N	Q	K	S	A	A	D	L	I	Q	L	A	S	Q	Q	T	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T																										T	T	T	S		G	G	G						T					T	T											T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	R	M	L	E	R	D	D	F	T	K	R	Y	N	N	H	Q	P	I	A	I	H	E	F	L	Y	P	L	V	Q	G	Y	D	S	I	A	L	E	A	D	V	E	L	G	G	T	D	Q	T	F	N	L	L	M	G	R	T	L	Q	S	R	Y	G	Q	E	S	Q	V	C	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S									T	T					T																	T		S						G	G	G														T	T
	.	.	.	.	.	.
Sequence	T	V	P	I	L	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)