Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c6b4gG_

Fold library idPDB HeaderMoleculeTitle
c6b4gG_2.65PDB header: transport proteinChain: G: PDB Molecule: nucleoporin gle1;


Added to library: Sat Jun 23 08:25:25 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HMRYVEIHRNLKGLRKYMAEQAKTNLKLKQRMGDMRREIRKSVGQLTTANKDKQQKIKSILTEALSNQVE
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP)


ST


S
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence SALVDPNNFVVEPRKPVEGATNNDPLLPSIFVYLINIFAKAAISQFINEAGARPETADPVGICVAAILSE
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)


GGGGSSS




TT
S


S
TTTT
GGGTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PDFLWRGASLIDILIAKFRIVCPVLFGYRGSEKTEQGRQRLGWWKESGQWISEQQHMDRMTGLGAGFAAI
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP) GGG
BTTB

T
GGGGT



TTSTT

TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence SLRKFALSKKQNPYPPRFYWMAMAKIVNTPPAEISNTQCVVLKAMVQNYEAKFIEFYGSAAIAALRTALI
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP) S


SSSSS

SS
TT

GGG

TT
T
 .........290.........300........
Sequence DFPARAPHKSAAVNSLEVLAQMLKRDTG
Predicted secondary structure












SS confidence



























Known secondary structure (DSSP)
SS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg

Disclaimer

Terms and Conditions