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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c6agfB_

Fold library idPDB HeaderMoleculeTitle
c6agfB_3.20PDB header: membrane proteinChain: B: PDB Molecule: sodium channel subunit beta-1;


Added to library: Sat Oct 13 08:31:42 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GCVEVDSETEAVYGMTFKILCISCKRRSETNAETFTEWTFRQKGTEEFVKILRYENEVLQLEEDERFEGR
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Known secondary structure (DSSP)








TTS


B


SSTTS





SSSS



SSS


SSS
SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence VVWNGSRGTKDLQDLSIFITNVTYNHSGDYECHVYRLLFFENYEHNTSVVKKIHIEVVDKANRDMASIVS
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Known secondary structure (DSSP)
S

S
SS

B

SS

GGG



SS


SS



S
 .........150.........160.........170...
Sequence EIMMYVLIVVLTIWLVAEMIYCYKKIAAATETA
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg

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