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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c5zvdB_

Fold library idPDB HeaderMoleculeTitle
c5zvdB_2.59PDB header: rna binding proteinChain: B: PDB Molecule: 389aa long hypothetical nucleolar protein;


Added to library: Sat Dec 22 09:54:07 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence YLEAFPKELREYYKNLFGKEEANKIMKKLREPVEHYYIRVNTLKISREKLIGELKKEGLKPLRSPYLPEG
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Known secondary structure (DSSP)
GGGS

TS

S
TTT

TT



SS
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LYFVREGPNFSDDFEPKLPVVVANKYAAESVYQGAMLYAPGVLKADKNIKEGDEVQIRDPKGLLVGIGIA
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Known secondary structure (DSSP)
B


S
TT



S

TTT

GGG
TT

TT

TT

 .........150.........160.........170.........180.........190.........200.........210
Sequence RMDYKEMTEATRGLAVEVTLPKFKLPSLSELKAFEKGYFYPQGLPSMVTARVLEPKEDDVIIDMAAAPGG
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Known secondary structure (DSSP) SS
TT
SSSSSB



TTSTTS




TTS
TT
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence KTTHIAQLLENKGEIIAIDKSKNRLRKMEENIKRLGVKNVKLVQMDARKLPDLGIKADKILLDAPCTALG
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Known secondary structure (DSSP) TS
S
S
TT


S
GGGGGGSS






TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence VRPKLWEERTLKHIEATARYQRAFIWAAIKSLRRGGVLVYSTCTLSYEENEGNVKFMIRKGMKLEEQSIF
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Known secondary structure (DSSP)
S

SS



TS


STTTTTT


S

 .........360.........370.........380....
Sequence IGSPGIGMNKVQRFYPHKHLTQGFFIAKLRKVKD
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Known secondary structure (DSSP)
STT
SS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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