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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c5z8yE_ | 3.40 | PDB header: cell adhesion | Chain: E: PDB Molecule: leucine-rich repeat transmembrane neuronal protein 2; |
Added to library: Sat Oct 13 09:04:02 2018 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | C | P | P | K | C | R | C | E | K | L | L | F | Y | C | D | S | Q | G | F | H | S | V | P | N | A | T | D | K | G | S | L | G | L | S | L | R | H | N | H | I | T | E | L | E | R | D | Q | F | A | S | F | S | Q | L | T | W | L | H | L | D | H | N | Q | I | S | T | V | K | E | D |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | T | T | S | S | S | S | S | ![]() | ![]() | ![]() | T | T | S | ![]() | ![]() | T | T | T | T | S | S | T | T | S | ![]() | ![]() | ![]() | S | ![]() | ![]() | T | T |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | A | F | Q | G | L | Y | K | L | K | E | L | I | L | S | S | N | K | I | F | Y | L | P | N | T | T | F | T | Q | L | I | N | L | Q | N | L | D | L | S | F | N | Q | L | S | S | L | H | P | E | L | F | Y | G | L | R | K | L | Q | T | L | H | L | R | S | N | S | L | R | T | I | P |
Predicted secondary structure | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | T | T | T | T | ![]() | ![]() | ![]() | S | S | T | T | T | T | T | T | T | T | ![]() | ![]() | ![]() | S | S | T | T | T | T | T | T | T | T | ![]() | ![]() | ![]() | S |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | V | R | L | F | W | D | C | R | S | L | E | F | L | D | L | S | T | N | R | L | R | S | L | A | R | N | G | F | A | G | L | I | K | L | R | E | L | H | L | E | H | N | Q | L | T | K | I | N | F | A | H | F | L | R | L | S | S | L | H | T | L | F | L | Q | W | N | K | I | S | N |
Predicted secondary structure | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | T | T | T | T | T | T | ![]() | ![]() | ![]() | S | S | T | T | T | T | T | T | T | T | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | G | G | G | G | T | T | S | ![]() | ![]() | ![]() | S | S | ![]() |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 |
Sequence | L | T | C | G | M | E | W | T | W | G | T | L | E | K | L | D | L | T | G | N | E | I | K | A | I | D | L | T | V | F | E | T | M | P | N | L | K | I | L | L | M | D | N | N | K | L | N | S | L | D | S | K | I | L | N | S | L | R | S | L | T | T | V | G | L | S | G | N | L | W |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | S | S | T | T | ![]() | ![]() | ![]() | T | T | S | ![]() | ![]() | T | T | T | T | T | S | T | T | ![]() | ![]() | ![]() | T | T | S | ![]() | ![]() | ![]() | ![]() | T | T | S | S | ![]() | ![]() | ![]() | T | T |   | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . |
Sequence | E | C | S | A | R | I | C | A | L | A | S | W | L | G | S | F | Q | G | R | W | E | H | S | I | L | C | H | S | P | D | H | T | Q | G | E | D | I | L | D | A | V | A | G | F | Q | L | C | W | ||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | S | G | G | G | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | ![]() | ![]() | S | S | B | B | S | G | G | G | T | T | S | B | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T |
Download: | PDB structure | FASTA sequence |
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