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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c5z5eB_

Fold library idPDB HeaderMoleculeTitle
c5z5eB_2.10PDB header: ligaseChain: B: PDB Molecule: neq417;


Added to library: Sat Feb 2 08:51:06 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DPKEYVLKGFFYPASEIYNSIAGFYDYGYLGTLLKNNFINEWKNYFLRLHPNFWEVDPAIVMPKEVFIAS
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Known secondary structure (DSSP)
GGGTTTTTTS


TT

TTSTT



SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence GHLENFNDPIVECNAPLGKVKWFNLMFPIYIGPDSQEALNLLKNLKENVSEQYIKDIIERVKKMVENEAY
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Known secondary structure (DSSP) S













STT

TT

T
 .........150.........160.........170.........180.........190.........200.........210
Sequence LRPETAQGPYVMFKREFILHRQKLPLGLAVVGKAFRNEISPRQLLLRLREFTQAELQIFFDPEDNEFDIN
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Known secondary structure (DSSP)
SSSTTTT
SS


SS
BTGGGB
S
SSS

S
GG
 .........220.........230.........240.........250.........260.........270.........280
Sequence EVKDVELNFLDKEGNYKRIKVKDLPFPEFYAYFVGKVKQFYERLGIPEERLRFRELSEKEKAFYNKYHVD
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Known secondary structure (DSSP) GTTT

TT

GGGSSS
T

GGG

TTTS
TT
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence IEINFPTYGWKEVGGIHYRTDHDLSGHMKVSGKDLTVQKDNKKFIPHVLELSFGVDRNVLALIDLFLTEE
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Known secondary structure (DSSP) TTT
TT




TT

TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence EYEIERDNQKVKEKRVVLKIPKHLAPIKVAVFPLLKKPELIEKAKEVYNMLKNYFYPIIYDEQGSIGRRY
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Known secondary structure (DSSP) TT


GGG
S

SSS
TTTSSS


SS
 .........430.........440.........450.........460........
Sequence RRVDEIGVPYAITIDYQTLEDNTVTIRDRDTMKQVRVKIEDLPNQLTL
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Known secondary structure (DSSP) TT
S
STTT

GGGTT





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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