PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5z2vB_

Fold library id	PDB Header	Molecule	Title
c5z2vB_	2.20	PDB header: dna binding protein	Chain: B: PDB Molecule: recombination protein recr;

Links to external resources
Added to library: Sat Jan 5 08:12:57 2019

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M S F S P L I R Q L I E S L R I L P G V G Q K S A Q R M A L M L L E R D R S G G L K L A Q A L T A A M E G V G H C R Q C R T L S E E E L C P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T S T T
T T T
S S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q C A D P R R D D S L L C V V E G P L D V F A V E Q T G Y R G R Y F V L K G H L S P L D G L G P E A I G I P E L E A R I R D G A F S E V I L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
T T S S T T T
S
S S
B G G G T B
T S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . .

Sequence A T N P T V E G E A T A H Y I A Q L L A G R G L T L S R I A H G V P L G G E L E L V D G G T L A H A L A G R R P I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T S S
S
T T
G G G S
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	S	F	S	P	L	I	R	Q	L	I	E	S	L	R	I	L	P	G	V	G	Q	K	S	A	Q	R	M	A	L	M	L	L	E	R	D	R	S	G	G	L	K	L	A	Q	A	L	T	A	A	M	E	G	V	G	H	C	R	Q	C	R	T	L	S	E	E	E	L	C	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S												T	T	S	T	T																																							T	T	T					S	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	C	A	D	P	R	R	D	D	S	L	L	C	V	V	E	G	P	L	D	V	F	A	V	E	Q	T	G	Y	R	G	R	Y	F	V	L	K	G	H	L	S	P	L	D	G	L	G	P	E	A	I	G	I	P	E	L	E	A	R	I	R	D	G	A	F	S	E	V	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S		T	T						S	S									T	T	T			S						S	S			B	G	G	G	T	B						T											S			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Sequence	A	T	N	P	T	V	E	G	E	A	T	A	H	Y	I	A	Q	L	L	A	G	R	G	L	T	L	S	R	I	A	H	G	V	P	L	G	G	E	L	E	L	V	D	G	G	T	L	A	H	A	L	A	G	R	R	P	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S															T	T	S	S									S			T	T			G	G	G	S											T