PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5y9pA_

Fold library id	PDB Header	Molecule	Title
c5y9pA_	2.20	PDB header: hydrolase	Chain: A: PDB Molecule: ribonuclease hii;

Links to external resources
Added to library: Sat Aug 4 08:32:06 2018

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A L E K E Q A L K E K Y V E M T Y F E N E I L K E H P N A I I C G I D E V G R G P L A G P V V A C A T I L N S N H N Y L G L V P V T K R L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
S S
S B S
T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L N E A L K N E V T A F A Y G I A T A E E I D E F N I Y K A T Q I A M Q R A I D G L S V Q P T H L L I D A M T L D N A L P Q V S L I K G D A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T
S S
S S
S S S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R S V S I A A A S I M A K V F R D D Y M T Q L S K D Y P E Y G F E K N A G Y G T K Q H L L A I D D I G I M K E H R K S F E P I K S L L L E H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
T T
T T B
T T S T T

. .

Sequence H H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	L	E	K	E	Q	A	L	K	E	K	Y	V	E	M	T	Y	F	E	N	E	I	L	K	E	H	P	N	A	I	I	C	G	I	D	E	V	G	R	G	P	L	A	G	P	V	V	A	C	A	T	I	L	N	S	N	H	N	Y	L	G	L	V	P	V	T	K	R	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T											T	T											S	S		S	B	S											T	T				T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	N	E	A	L	K	N	E	V	T	A	F	A	Y	G	I	A	T	A	E	E	I	D	E	F	N	I	Y	K	A	T	Q	I	A	M	Q	R	A	I	D	G	L	S	V	Q	P	T	H	L	L	I	D	A	M	T	L	D	N	A	L	P	Q	V	S	L	I	K	G	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										S																															T		S	S			S						S					S	S	S						T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	S	V	S	I	A	A	A	S	I	M	A	K	V	F	R	D	D	Y	M	T	Q	L	S	K	D	Y	P	E	Y	G	F	E	K	N	A	G	Y	G	T	K	Q	H	L	L	A	I	D	D	I	G	I	M	K	E	H	R	K	S	F	E	P	I	K	S	L	L	L	E	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																												G	G	G						T	T																	T	T	B		T	T	S	T	T
	.	.
Sequence	H	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)