PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5y82B_

Fold library id	PDB Header	Molecule	Title
c5y82B_	2.52	PDB header: transport protein	Chain: B: PDB Molecule: membrane protein insertase yidc;

Links to external resources
Added to library: Sat Jul 14 08:18:46 2018

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence I K V V R S E K E I V V L T R F E E Y H F D L E K G I L K D F Y T M V D G R K H V F T Y G N D G F D V L D E G T P L T V I E E P I V T G V G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S S S S
T T S
S S
S S
S S S S B
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K V S E G F S D E V S M V Y N Y G Y V K K I F T I K N N E N Y T F F V D I E S S K P V D V T V P R V S V D T S T D R Y M E N Y F A S F N P K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
S S T T
S S
S S G G G T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . .

Sequence T R T L V L L K H D E G L L F E G T L K V N G Q K R F I V F M G P N K R T L I K K A F P E D Y D V L I K A L V N I P G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T
S
T T T T T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	I	K	V	V	R	S	E	K	E	I	V	V	L	T	R	F	E	E	Y	H	F	D	L	E	K	G	I	L	K	D	F	Y	T	M	V	D	G	R	K	H	V	F	T	Y	G	N	D	G	F	D	V	L	D	E	G	T	P	L	T	V	I	E	E	P	I	V	T	G	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S							S	S							S	S	S										T	T	S								S	S		S	S				S	S	S	S	B				S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	V	S	E	G	F	S	D	E	V	S	M	V	Y	N	Y	G	Y	V	K	K	I	F	T	I	K	N	N	E	N	Y	T	F	F	V	D	I	E	S	S	K	P	V	D	V	T	V	P	R	V	S	V	D	T	S	T	D	R	Y	M	E	N	Y	F	A	S	F	N	P	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S												S	S									T	T		S	S																					S	S	G	G	G					T	T							T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Sequence	T	R	T	L	V	L	L	K	H	D	E	G	L	L	F	E	G	T	L	K	V	N	G	Q	K	R	F	I	V	F	M	G	P	N	K	R	T	L	I	K	K	A	F	P	E	D	Y	D	V	L	I	K	A	L	V	N	I	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T										T	T				S																											T	T	T									T	T	S