PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5y7yA_

Fold library id	PDB Header	Molecule	Title
c5y7yA_	2.40	PDB header: transcription	Chain: A: PDB Molecule: aryl hydrocarbon receptor repressor;

Links to external resources
Added to library: Sat Sep 23 08:23:42 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K R H R D R L N A E L D H L A S L L P F P P D I I S K L D K L S V L R L S V S Y L R V K S F F Q V V Q E Q S E G R L L L E S L N G F A L V V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S S S
T T
S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence S A E G T I F Y A S A T I V D Y L G F H Q T D V M H Q N I Y D Y I H V D D R Q D F C R Q L H W A M D P P Q D D A I L G R L L R A Q E P T E Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S B
T T S
T T S B G G G G B
G G G S T T S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 .

Sequence S A F L T R C F I C R V R C L L D S T S G F L T M Q F Q G K L K F L F G Q K K K A P S G A M L P P R L S L F C I A A P V L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G S
T T
S S S S
B
S S S
B

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	R	H	R	D	R	L	N	A	E	L	D	H	L	A	S	L	L	P	F	P	P	D	I	I	S	K	L	D	K	L	S	V	L	R	L	S	V	S	Y	L	R	V	K	S	F	F	Q	V	V	Q	E	Q	S	E	G	R	L	L	L	E	S	L	N	G	F	A	L	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	S	S	S						T	T																																				S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	S	A	E	G	T	I	F	Y	A	S	A	T	I	V	D	Y	L	G	F	H	Q	T	D	V	M	H	Q	N	I	Y	D	Y	I	H	V	D	D	R	Q	D	F	C	R	Q	L	H	W	A	M	D	P	P	Q	D	D	A	I	L	G	R	L	L	R	A	Q	E	P	T	E	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S	B						T	T						S							T	T	S	B	G	G	G	G	B		G	G	G									S	T	T	S																				T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Sequence	S	A	F	L	T	R	C	F	I	C	R	V	R	C	L	L	D	S	T	S	G	F	L	T	M	Q	F	Q	G	K	L	K	F	L	F	G	Q	K	K	K	A	P	S	G	A	M	L	P	P	R	L	S	L	F	C	I	A	A	P	V	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	S											T	T		S	S	S	S																			B		S	S	S		B