PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5xxuG_

Fold library id	PDB Header	Molecule	Title
c5xxuG_	3.35	PDB header: ribosome	Chain: G: PDB Molecule: ribosomal protein es6;

Links to external resources
Added to library: Sat Sep 2 08:28:58 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M K L N L A N P Q A G M Q K T V E V D D E K K L L P F F E K R M G A E V A G D S I G D E F K G Y I F R I S G G N D K Q G P M M Q G V L V N H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
S S G G G T T T T T
S S
S T T
S S
S
T T
-
T T
S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R V R L L F R K G M K C Y R Q R R T G E K K R K S V R G S I V G P D L A V L N L V L V K K G P E T I P G L T D A E R P R R L G P K R A N N I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S
S S T T
S S
S S
S
S S
T T T T S
S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R K L F N L S K D Q D V R K Y V V R R Q I E G K K K T K A P K I Q R L I T K T R V Q R K R A Y L A K Q R R S V I K S R E E A K A Y K D V L S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T T T
S S T T
B
S S S
B
T T

. . . . . . . . . 220

Sequence A Y K H E L R K K R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	L	N	L	A	N	P	Q	A	G	M	Q	K	T	V	E	V	D	D	E	K	K	L	L	P	F	F	E	K	R	M	G	A	E	V	A	G	D	S	I	G	D	E	F	K	G	Y	I	F	R	I	S	G	G	N	D	K	Q	G	P	M	M	Q	G	V	L	V	N	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T	T									S	S	G	G	G	T	T	T	T	T			S	S						S	T	T		S	S			S											T	T		-			T	T			S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	V	R	L	L	F	R	K	G	M	K	C	Y	R	Q	R	R	T	G	E	K	K	R	K	S	V	R	G	S	I	V	G	P	D	L	A	V	L	N	L	V	L	V	K	K	G	P	E	T	I	P	G	L	T	D	A	E	R	P	R	R	L	G	P	K	R	A	N	N	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T		S	S				S	S	T	T										S	S			S	S		S											S	S			T	T	T	T	S						S					S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	K	L	F	N	L	S	K	D	Q	D	V	R	K	Y	V	V	R	R	Q	I	E	G	K	K	K	T	K	A	P	K	I	Q	R	L	I	T	K	T	R	V	Q	R	K	R	A	Y	L	A	K	Q	R	R	S	V	I	K	S	R	E	E	A	K	A	Y	K	D	V	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T		T	T	T	T		S	S	T	T					B		S	S	S			B						T	T
	.	.	.	.	.	.	.	.	.	220
Sequence	A	Y	K	H	E	L	R	K	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)