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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c5xwuB_ | 3.16 | PDB header: cell adhesion | Chain: B: PDB Molecule: leucine-rich repeat and fibronectin type iii domain- |
Added to library: Sat Jun 9 09:06:13 2018 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | P | C | P | G | R | C | I | C | Q | N | V | A | P | T | L | T | M | L | C | A | K | T | G | L | L | F | V | P | P | A | I | D | R | R | V | V | E | L | R | L | T | D | N | F | I | A | A | V | R | R | R | D | F | A | N | M | T | S | L | V | H | L | T | L | S | R | N | T | I | G |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | T | T | S | S | S | S | S | T | T | S | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | T | T | T | T | S | S | T | T | ![]() | ![]() | ![]() | S | S |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | Q | V | A | A | G | A | F | A | D | L | R | A | L | R | A | L | H | L | D | S | N | R | L | A | E | V | R | G | D | Q | L | R | G | L | G | N | L | R | H | L | I | L | G | N | N | Q | I | R | K | V | E | S | A | A | F | D | A | F | L | S | T | V | E | D | L | D | L | S | Y | N |
Predicted secondary structure | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | T | T | T | T | T | T | T | T | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | T | T | T | S | T | T | T | T | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | T | T | G | G | G | T | T | T | ![]() | ![]() | ![]() | S | S |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | N | L | E | A | L | P | W | E | A | V | G | Q | M | V | N | L | N | T | L | T | L | D | H | N | L | I | D | H | I | A | E | G | T | F | V | Q | L | H | K | L | V | R | L | D | M | T | S | N | R | L | H | K | L | P | P | D | G | L | F | L | P | L | T | V | S | F | G | G | N | P |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | ![]() | ![]() | ![]() | ![]() | T | T | T | T | ![]() | ![]() | ![]() | S | S | S | T | T | S | S | T | T | ![]() | ![]() | ![]() | S | S | S | S | S | T | T | ![]() | ![]() | ![]() | S | S |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 |
Sequence | L | H | C | N | C | E | L | L | W | L | R | R | L | T | R | E | D | D | L | E | T | C | A | T | P | E | H | L | T | D | R | Y | F | W | S | I | P | E | E | E | F | L | C | E | P | P | L | I | T | R | Q | A | G | G | R | A | L | V | V | E | G | Q | A | V | S | L | R | C | R | A |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | S | G | G | G | ![]() | ![]() | ![]() | ![]() | T | S | B | ![]() | ![]() | ![]() | S | G | G | G | T | T | B | G | G | G | S | G | G | G | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . |
Sequence | V | G | D | P | E | P | V | V | H | W | V | A | P | D | G | R | L | L | G | N | S | S | R | T | R | V | R | G | D | G | T | L | D | V | T | I | T | T | L | R | D | S | G | T | F | T | C | I | A | S | N | A | A | G | E | A | T | A | P | V | E | V | C | |||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | S | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | ![]() | ![]() | S | T | T | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() |
Download: | PDB structure | FASTA sequence |
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