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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5xf9E_

Fold library idPDB HeaderMoleculeTitle
c5xf9E_2.58PDB header: oxidoreductaseChain: E: PDB Molecule: nad-reducing hydrogenase;


Added to library: Sat Aug 26 08:23:22 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TTERQRTAPGLLAALHQARSPLDAQALAELSTAFSLPPGEIAATASFYHFFQTPPARYQIHFVDHVVDHH
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Known secondary structure (DSSP)

GGG


TTTT



TS
TSGGGSS


S

 .........80.........90.........100.........110.........120.........130.........140
Sequence AGVAALCNHLCAAFAIQPGQRTADARLFVGWTACAGLSDQAPAALINGRPMPRLDAARIDALIEKIQAQI
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Known secondary structure (DSSP) TTT

TT
B
TTSSS

S
GGG
S
TT
S

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence PMDQWPTEWFAVTNAIHRHGPLLTWLDTTPAEAVFEHPTAHDPDAILQAVTDAGLRGRGGAGFPTATKWR
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Known secondary structure (DSSP)
GGGS
GGGG






S
GGGGGGSSTTT
T
B
SSSS

B
 .........220.........230.........240.........250.........260.........270.........280
Sequence FCRENADPERFLICNADEGEPGTFKDRVLLTRYPEHLFAGMILAARAIGADKAILYLRYEYQYLLPQLEA
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Known secondary structure (DSSP) TSS
S




STT


T
S
GGGGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence ARERIASAERVTLEIALGAGAYVCGEESALIESLEGKPGRPRVRPPYPVTQGYLGHPTVVNNVETLVAVA
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Known secondary structure (DSSP) T





S
GGGGSTTS





SSS
TTTS
GGGS
 .........360.........370.........380.........390.........400.........410.........420
Sequence AIVGNGAAWWRALGTPDSSGPKLFCVSGDVAQPGLYEFPYGVALGDVVTAARPLGTRYAVQVSGPSGTLL
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Known secondary structure (DSSP) SB
SSSBSSBSS
TT
BTT
BSS
SSTTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence PATPEQLARPLAFEALPCNGTVMVFDVRRDPVAIVHHFARFFAHESCGFCTPCRVGTQLIAKTFEKIAAG
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Known secondary structure (DSSP)

TSBBSTTSB

SS
TT



S
STT
 .........500.........510.........520.........530.........540.........550.........560
Sequence YATRFDLERLAPALEAMRLASNCGFGLSAGNPVRDLIAHFRQQLEAQLQPHDFIPAFSLDAELAATRHLA
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Known secondary structure (DSSP)

BTT
SSTTTTT
B





SS
T



T
 .......
Sequence QFEQPEV
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Known secondary structure (DSSP) TTTS



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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