PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5x5yB_

Fold library id	PDB Header	Molecule	Title
c5x5yB_	3.47	PDB header: membrane protein	Chain: B: PDB Molecule: probable atp-binding component of abc transporter;

Links to external resources
Added to library: Sat Apr 15 09:37:20 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A T L K A Q H L A K S Y K G R Q V V R D V S M S I D S G Q I V G L L G P N G A G K T T C F Y M I V G L V Q A D Q G V V R I D E Q N V T H L P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
T T S T T S S
S T T
S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence M H G R A R A G I G Y L P Q E A S I F R K L S V S D N I M A I L E T R S D L D R N G R K E A L E G L L Q E F H I H H I R D N L G M S L S G G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S
S
T T S B T T
S S
T T
G G G S S S B T T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E R R R V E I A R A L A S A P K F I L L D E P F A G V D P I S V G D I K Q I I H H L K A K G I G I L I T D H N V R E T L D I C E T A Y I V N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S T T S S
T T T T T T
S
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . .

Sequence D G Q L I A E G D A E S I L A N D L V K E V Y L G H E F R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S T
T S
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	T	L	K	A	Q	H	L	A	K	S	Y	K	G	R	Q	V	V	R	D	V	S	M	S	I	D	S	G	Q	I	V	G	L	L	G	P	N	G	A	G	K	T	T	C	F	Y	M	I	V	G	L	V	Q	A	D	Q	G	V	V	R	I	D	E	Q	N	V	T	H	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T													T	T									T	T	S	T										T	S	S			S							T	T				S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	M	H	G	R	A	R	A	G	I	G	Y	L	P	Q	E	A	S	I	F	R	K	L	S	V	S	D	N	I	M	A	I	L	E	T	R	S	D	L	D	R	N	G	R	K	E	A	L	E	G	L	L	Q	E	F	H	I	H	H	I	R	D	N	L	G	M	S	L	S	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T						S	S			S		T	T	S	B										T	T		S	S																	T	T		G	G	G	S	S	S	B	T	T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	R	R	R	V	E	I	A	R	A	L	A	S	A	P	K	F	I	L	L	D	E	P	F	A	G	V	D	P	I	S	V	G	D	I	K	Q	I	I	H	H	L	K	A	K	G	I	G	I	L	I	T	D	H	N	V	R	E	T	L	D	I	C	E	T	A	Y	I	V	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T			S						S	T	T	S	S			T	T	T													T	T	T								S										S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Sequence	D	G	Q	L	I	A	E	G	D	A	E	S	I	L	A	N	D	L	V	K	E	V	Y	L	G	H	E	F	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T							S						T								T	S		T	T