PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5x3xq_

Fold library id	PDB Header	Molecule	Title
c5x3xq_	2.79	PDB header: transport protein	Chain: Q: PDB Molecule: uncharacterized protein cbiq;

Links to external resources
Added to library: Sat Apr 15 08:45:02 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M S I A S I D R V A A Q G H W R S R P L A E K S L I G L G F L A L A V T V P P F P G A V L V T V A I L A F T F L G A R V P L R F W A S V A V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S G G G G S
S
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L P L G F L T T G A A V L L I Q I G P E G I G L A P D G P A K A A A L V M R A T A A T C C L L F L A T T T P A A D L L S G L R R W R V P A E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S B
S S S
B
T T S
G G G S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L I E I A L L T Y R F V F I L A E E A A A M T T A Q R A R L G H A T R R R W L R S T A Q V I A A L L P R A L T R A R R L E T G L G A R N W Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T S S T T S
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . .

Sequence G E M R V L S T R P P A S A R V L G L I L T L Q A A I L A A G V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	S	I	A	S	I	D	R	V	A	A	Q	G	H	W	R	S	R	P	L	A	E	K	S	L	I	G	L	G	F	L	A	L	A	V	T	V	P	P	F	P	G	A	V	L	V	T	V	A	I	L	A	F	T	F	L	G	A	R	V	P	L	R	F	W	A	S	V	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T								S	S	G	G	G	G	S																			S																			T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	P	L	G	F	L	T	T	G	A	A	V	L	L	I	Q	I	G	P	E	G	I	G	L	A	P	D	G	P	A	K	A	A	A	L	V	M	R	A	T	A	A	T	C	C	L	L	F	L	A	T	T	T	P	A	A	D	L	L	S	G	L	R	R	W	R	V	P	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S		S											B			S	S	S				B		T	T																										S									G	G	G	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	I	E	I	A	L	L	T	Y	R	F	V	F	I	L	A	E	E	A	A	A	M	T	T	A	Q	R	A	R	L	G	H	A	T	R	R	R	W	L	R	S	T	A	Q	V	I	A	A	L	L	P	R	A	L	T	R	A	R	R	L	E	T	G	L	G	A	R	N	W	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																													T	T	T	T	S	S																																T	T	S		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Sequence	G	E	M	R	V	L	S	T	R	P	P	A	S	A	R	V	L	G	L	I	L	T	L	Q	A	A	I	L	A	A	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S