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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c5wk4E_ | 1.50 | PDB header: immune system | Chain: E: PDB Molecule: variable lymphocyte receptor 39; |
Added to library: Sat Dec 16 08:49:22 2017 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | C | P | S | Q | C | S | C | R | G | T | T | V | N | C | D | S | R | S | L | A | S | V | P | A | G | I | P | T | D | R | Q | N | L | W | L | N | N | N | Q | I | T | K | L | E | P | G | V | F | D | S | L | T | A | L | T | F | L | N | V | G | D | N | Q | L | S | A | L | P | I | G |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | S | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | S | S | S | S | S | S | S | S | ![]() | ![]() | ![]() | S | S | T | T | T | T | T | T | T | T | S | ![]() | ![]() | ![]() | S | S | T | T |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | V | F | D | R | L | A | Q | L | T | R | L | G | L | S | H | N | Q | F | T | A | L | P | A | G | V | F | D | K | L | P | K | L | T | H | L | V | L | H | T | N | Q | L | K | S | I | P | R | G | A | F | D | N | L | K | S | L | T | H | I | Y | L | F | N | N | P | W | D | C | E | C |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | T | T | T | T | ![]() | ![]() | ![]() | S | S | S | T | T | T | T | T | T | T | T | ![]() | ![]() | ![]() | S | S | S | T | T | T | T | T | T | T | T | S | ![]() | ![]() | ![]() | S | S | B | T | T | B |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . |
Sequence | S | D | I | L | Y | L | K | N | W | I | V | Q | H | A | S | I | V | N | P | H | P | Y | G | G | V | D | N | V | K | C | S | G | T | N | T | P | V | R | A | V | T | E | A | S | T | S | P | S | K | C | P | |||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | G | G | G | B | S | T | T | S | G | G | G | S | B | B | T | T | T | B | G | G | G | G | G | G | B | G | G | G |
Download: | PDB structure | FASTA sequence |
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