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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c5wi5C_

Fold library idPDB HeaderMoleculeTitle
c5wi5C_2.00PDB header: transferaseChain: C: PDB Molecule: udp-n-acetylglucosamine 1-carboxyvinyltransferase 1;


Added to library: Sat Aug 5 08:29:06 2017
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence MDKIVVQGGDNRLVGSVTIEGAKNAVLPLLAATILASEGKTVLQNVPILSDVFIMNQVVGGLNAKVDFDE
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Known secondary structure (DSSP)

S






B
GGGS
S



TTT
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence EAHLVKVDATGDITEEAPYKYVSKMRASIVVLGPILARVGHAKVSMPGGCTIGSRPIDLHLKGLEAMGVK
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Known secondary structure (DSSP) TTT

S




TT
GGGGGGS




TT




TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence ISQTAGYIEAKAERLHGAHIYMDFPSVGATQNLMMAATLADGVTVIENAAREPEIVDLAILLNEMGAKVK
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Known secondary structure (DSSP) TT
TT

SS

TTST



TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence GAGTETITITGVEKLHGTTHNVVQDRIEAGTFMVAAAMTGGDVLIRDAVWEHNRPLIAKLLEMGVEVIEE
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Known secondary structure (DSSP)
TTSS

S




B
TT
T

GGGGT
 .........290.........300.........310.........320.........330.........340.........350
Sequence DEGIRVRSQLENLKAVHVKTLPHPGFPTDMQAQFTALMTVAKGESTMVETVFENRFQHLEEMRRMGLHSE
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Known secondary structure (DSSP) TT

GGG
B

B
STTSB
GGGTTSBS

S
SS

GGGT

 .........360.........370.........380.........390.........400.........410.........420
Sequence IIRDTARIVGGQPLQGAEVLSTDLRASAALILTGLVAQGETVVGKLVHLDRGYYGFHEKLAQLGAKIQRI
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Known secondary structure (DSSP) TTTT


B



SSB
TTTGGGT
SSTT

 .
Sequence E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg

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