PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5wchC_

Fold library id	PDB Header	Molecule	Title
c5wchC_	2.50	PDB header: hydrolase	Chain: C: PDB Molecule: probable ubiquitin carboxyl-terminal hydrolase faf-x;

Links to external resources
Added to library: Sat Jul 7 08:50:20 2018

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G F V G L K N A G A T C Y M N S V I Q Q L Y M I P S I R N G I L A I E G T G T E D R A A Y N I G V L R H L Q V I F G H L A A S R L Q Y Y V P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T S T
S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R G F W K Q F R L W G E P V N L R E Q H D A L E F F N S L V D S L D E A L K A L G H P A M L S K V L G G S F A D Q K I C Q G C P H R Y E C E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T S
T T S
S S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence E S F T T L N V D I R N H Q N L L D S L E Q Y V K G D L L E G A N A Y H C E K C N K K V D T V K R L L I K K L P P V L A I Q L K R F D Y D W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S S S
S B
G G G
T T T T
S
T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence E R E C A I K F N D Y F E F P R E L D M E P Y T V A G V A K L E G S T K Y R L V G V L V H S G Q A S G G H Y Y S Y I I Q R R W Y K F D D G D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
B
S
G G G B
S
T T S
T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . .

Sequence V T E C K M D D D E E M K N Q C F G G E Y M G E V F D H K R M S Y R R Q K R W W N A Y I L F Y E R M D T Q D D E L I R Y I S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S T
T T
G G G T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	F	V	G	L	K	N	A	G	A	T	C	Y	M	N	S	V	I	Q	Q	L	Y	M	I	P	S	I	R	N	G	I	L	A	I	E	G	T	G	T	E	D	R	A	A	Y	N	I	G	V	L	R	H	L	Q	V	I	F	G	H	L	A	A	S	R	L	Q	Y	Y	V	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S													T	S									T			S																													S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	G	F	W	K	Q	F	R	L	W	G	E	P	V	N	L	R	E	Q	H	D	A	L	E	F	F	N	S	L	V	D	S	L	D	E	A	L	K	A	L	G	H	P	A	M	L	S	K	V	L	G	G	S	F	A	D	Q	K	I	C	Q	G	C	P	H	R	Y	E	C	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T					T	T	S																						T	T	S																			S	S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	E	S	F	T	T	L	N	V	D	I	R	N	H	Q	N	L	L	D	S	L	E	Q	Y	V	K	G	D	L	L	E	G	A	N	A	Y	H	C	E	K	C	N	K	K	V	D	T	V	K	R	L	L	I	K	K	L	P	P	V	L	A	I	Q	L	K	R	F	D	Y	D	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S					S	S	S		S	B																G	G	G					T	T	T	T																S													T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	E	R	E	C	A	I	K	F	N	D	Y	F	E	F	P	R	E	L	D	M	E	P	Y	T	V	A	G	V	A	K	L	E	G	S	T	K	Y	R	L	V	G	V	L	V	H	S	G	Q	A	S	G	G	H	Y	Y	S	Y	I	I	Q	R	R	W	Y	K	F	D	D	G	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T										B			S					G	G	G	B																							S		T	T	S																	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Sequence	V	T	E	C	K	M	D	D	D	E	E	M	K	N	Q	C	F	G	G	E	Y	M	G	E	V	F	D	H	K	R	M	S	Y	R	R	Q	K	R	W	W	N	A	Y	I	L	F	Y	E	R	M	D	T	Q	D	D	E	L	I	R	Y	I	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	S									T																																	T	T				G	G	G	T	S