PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5vqgA_

Fold library id	PDB Header	Molecule	Title
c5vqgA_	2.60	PDB header: rna binding protein	Chain: A: PDB Molecule: tudor and kh domain-containing protein homolog;

Links to external resources
Added to library: Sat Jun 17 09:01:37 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L Y F Q S N A G P S I E V Y V S A V S S P S R F W V Q F V G P Q V A Q L D D L V A H M T E Y Y S K K E N R E A H T L R H V S V G Q V V A A V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T S S T S T B
S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence F R H D G R W Y R A R V H D I R P N E F D S S Q Q V A D V F Y L D Y G D S E Y V A T H E L C E L R A D L L R L R F Q A M E C F L A G V R P A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T T S
T T T T T
G G G
G G G G
S
T T
B

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . .

Sequence S K W H P Q A V E R F E E L T Q V A R W K A L V S R T C T Y K K T K D K E I P G I K L F D V T G E L D V G A V L V A E G W A V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S
T T S B

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	Y	F	Q	S	N	A	G	P	S	I	E	V	Y	V	S	A	V	S	S	P	S	R	F	W	V	Q	F	V	G	P	Q	V	A	Q	L	D	D	L	V	A	H	M	T	E	Y	Y	S	K	K	E	N	R	E	A	H	T	L	R	H	V	S	V	G	Q	V	V	A	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T															T	T							S	S																		T	S							T	B		S				T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	R	H	D	G	R	W	Y	R	A	R	V	H	D	I	R	P	N	E	F	D	S	S	Q	Q	V	A	D	V	F	Y	L	D	Y	G	D	S	E	Y	V	A	T	H	E	L	C	E	L	R	A	D	L	L	R	L	R	F	Q	A	M	E	C	F	L	A	G	V	R	P	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	T	T	S														T	T												T	T	T								G	G	G						G	G	G	G		S										T	T			B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Sequence	S	K	W	H	P	Q	A	V	E	R	F	E	E	L	T	Q	V	A	R	W	K	A	L	V	S	R	T	C	T	Y	K	K	T	K	D	K	E	I	P	G	I	K	L	F	D	V	T	G	E	L	D	V	G	A	V	L	V	A	E	G	W	A	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T	T	T	S																																								T	T	S	B