PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5vbaA_

Fold library id	PDB Header	Molecule	Title
c5vbaA_	2.27	PDB header: chaperone, hydrolase	Chain: A: PDB Molecule: lysozyme, esx-1 secretion-associated protein espg1 chimera;

Links to external resources
Added to library: Sat Jul 8 08:21:35 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E N L Y F Q G N I F E M L R I D E G L R L K I Y K D T E G Y Y T I G I G H L L T K S P S L N A A K S E L D K A I G R N T N G V I T K D E A E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T
T T S
T T
S S
T S
T T B

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K L F N Q D V D A A V R G I L R N A K L K P V Y D S L D A V R R A A L I N M V F Q M G E T G V A G F T N S L R M L Q Q K R W D E A A V N L A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T T S
T
T T
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence K S R W Y N Q T P N R A K R V I T T F R T G T W D A Y A M V G V E V T I D G M L V L A D R L H L V D F P V A L G I R P D D L R E I V W D Q V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S S S S G G G T T
G G G

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence R R D L T A Q G V L D H N G Y P H P T V A S M V D T L S R P D R T L E A R W W R R D V V M V R F V V A R K D D R H V I A V R N G D L L V L Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S B
T T S
B
S S
S T T
T T T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence L V A P Q V G L A G M V T A V L G T A D P A S V E P L T G I A S E L A E A G L A P T A A R I Y T E I V S N P D S W V E I V A S Q R H P G G T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
B
B
S
B G G G G G
S
S
T T S

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . .

Sequence T T H T K A A A G V L D S A H G R V V S L P R I V S G E L Y G S F L P G T P Q N L Q L A L D A L V E L L P A G S W L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T
B T T
T S T T
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg
Disclaimer

Terms and Conditions

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	N	L	Y	F	Q	G	N	I	F	E	M	L	R	I	D	E	G	L	R	L	K	I	Y	K	D	T	E	G	Y	Y	T	I	G	I	G	H	L	L	T	K	S	P	S	L	N	A	A	K	S	E	L	D	K	A	I	G	R	N	T	N	G	V	I	T	K	D	E	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S													T										T	T	S						T	T						S	S														T	S			T	T	B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	L	F	N	Q	D	V	D	A	A	V	R	G	I	L	R	N	A	K	L	K	P	V	Y	D	S	L	D	A	V	R	R	A	A	L	I	N	M	V	F	Q	M	G	E	T	G	V	A	G	F	T	N	S	L	R	M	L	Q	Q	K	R	W	D	E	A	A	V	N	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T		T	T	T							S																						T										T	T										T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	K	S	R	W	Y	N	Q	T	P	N	R	A	K	R	V	I	T	T	F	R	T	G	T	W	D	A	Y	A	M	V	G	V	E	V	T	I	D	G	M	L	V	L	A	D	R	L	H	L	V	D	F	P	V	A	L	G	I	R	P	D	D	L	R	E	I	V	W	D	Q	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S						S														S	S	S	G	G	G	T																			T						G	G	G
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	R	R	D	L	T	A	Q	G	V	L	D	H	N	G	Y	P	H	P	T	V	A	S	M	V	D	T	L	S	R	P	D	R	T	L	E	A	R	W	W	R	R	D	V	V	M	V	R	F	V	V	A	R	K	D	D	R	H	V	I	A	V	R	N	G	D	L	L	V	L	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	S	B		T	T	S		B												S	S		S										T	T												T	T									T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	L	V	A	P	Q	V	G	L	A	G	M	V	T	A	V	L	G	T	A	D	P	A	S	V	E	P	L	T	G	I	A	S	E	L	A	E	A	G	L	A	P	T	A	A	R	I	Y	T	E	I	V	S	N	P	D	S	W	V	E	I	V	A	S	Q	R	H	P	G	G	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T	S															B						B		S		B	G	G	G	G	G																	S		S												T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Sequence	T	T	H	T	K	A	A	A	G	V	L	D	S	A	H	G	R	V	V	S	L	P	R	I	V	S	G	E	L	Y	G	S	F	L	P	G	T	P	Q	N	L	Q	L	A	L	D	A	L	V	E	L	L	P	A	G	S	W	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S								T	T		B									T	T																								T	S	T	T		S