PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5uz5G_

Fold library id	PDB Header	Molecule	Title
c5uz5G_	3.56	PDB header: nuclear protein/rna	Chain: G: PDB Molecule: 56 kda u1 small nuclear ribonucleoprotein component;

Links to external resources
Added to library: Sat Nov 18 08:33:55 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence F D I W K N L D R I R S T K K N A G Q F I K G S L L I L P M R T E D K Q Q F D E C M D E L H K Y I S K D I L R C Y P Q K E M L F Y I V L K D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B T T S S
S B
S S
S
T T T S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence F N I L D S C F V L S V L L A F Q K R L W M A P S E K S Y F R V P K N I N L T G S F Y L P K N I E T S S I V E V G F N V V P D F Q Q F Q V K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
T T T
S S B
S S
S
S
S S
S S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A C H V S K F M N E L S N F F S Q V E F G K C E A N V I N Y F K R E Y N R T Y S Q I S L A L Y E L P L I G D G L F D I K S Y I S K T R P I I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T T T T G G G T T T S S S

. . . . . . . . . 220 . . . . . . . . .

Sequence E T S K A Q M I K H I S E M K A Y N E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	F	D	I	W	K	N	L	D	R	I	R	S	T	K	K	N	A	G	Q	F	I	K	G	S	L	L	I	L	P	M	R	T	E	D	K	Q	Q	F	D	E	C	M	D	E	L	H	K	Y	I	S	K	D	I	L	R	C	Y	P	Q	K	E	M	L	F	Y	I	V	L	K	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B											T	T	S	S			S	B		S	S										S																	T	T	T	S																	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	N	I	L	D	S	C	F	V	L	S	V	L	L	A	F	Q	K	R	L	W	M	A	P	S	E	K	S	Y	F	R	V	P	K	N	I	N	L	T	G	S	F	Y	L	P	K	N	I	E	T	S	S	I	V	E	V	G	F	N	V	V	P	D	F	Q	Q	F	Q	V	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B																						T	T	T			S	S	B			S	S											S							S				S	S		S	S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	C	H	V	S	K	F	M	N	E	L	S	N	F	F	S	Q	V	E	F	G	K	C	E	A	N	V	I	N	Y	F	K	R	E	Y	N	R	T	Y	S	Q	I	S	L	A	L	Y	E	L	P	L	I	G	D	G	L	F	D	I	K	S	Y	I	S	K	T	R	P	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S																					T	T	T																					T	G	G	G	T	T	T	S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Sequence	E	T	S	K	A	Q	M	I	K	H	I	S	E	M	K	A	Y	N	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)