PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5uxgB_

Fold library id	PDB Header	Molecule	Title
c5uxgB_	1.72	PDB header: lyase	Chain: B: PDB Molecule: aldehyde deformylating oxygenase;

Links to external resources
Added to library: Sat Mar 3 08:30:53 2018

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M D K N W F S T P Q E I R E G I K Y L S A H F Y P A S I M D R W K I L K K L S F E K A K I I A N Y S L Q Q V I E E I E H F D F F N E Y F K E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S T T S
S
T T T G G G G T
T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D P L T T V R L P P S Y I K L F D G L V E D F Q S S R W R E N I A T R F H M I T E G V L A T V G L K I L N E T S R K Y N L L K F N E G I K R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S T T
T S T T
T T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I I E D E A R H V S F G L S L I E D K E Y A V K R V E E L F P L A V Q I V K E G K D K I E P L G Y S I Q E L V N L M E E L K K A R I N K I L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T G G G T

.

Sequence G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg
Disclaimer

Terms and Conditions

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	D	K	N	W	F	S	T	P	Q	E	I	R	E	G	I	K	Y	L	S	A	H	F	Y	P	A	S	I	M	D	R	W	K	I	L	K	K	L	S	F	E	K	A	K	I	I	A	N	Y	S	L	Q	Q	V	I	E	E	I	E	H	F	D	F	F	N	E	Y	F	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S	T	T	S																S		T	T	T	G	G	G	G	T															T																				T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	P	L	T	T	V	R	L	P	P	S	Y	I	K	L	F	D	G	L	V	E	D	F	Q	S	S	R	W	R	E	N	I	A	T	R	F	H	M	I	T	E	G	V	L	A	T	V	G	L	K	I	L	N	E	T	S	R	K	Y	N	L	L	K	F	N	E	G	I	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		S	T	T																			T	S	T	T														T	T	T																T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	I	E	D	E	A	R	H	V	S	F	G	L	S	L	I	E	D	K	E	Y	A	V	K	R	V	E	E	L	F	P	L	A	V	Q	I	V	K	E	G	K	D	K	I	E	P	L	G	Y	S	I	Q	E	L	V	N	L	M	E	E	L	K	K	A	R	I	N	K	I	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T																									T					G	G	G	T
	.
Sequence	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)